Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0285
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.7  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   7.5  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.9  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 143 CTSMFIVVIYYLSC 102
           C S+  + +YY+SC
Sbjct: 178 CISILAIKVYYISC 191


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 734 CFEEPAKGQDLPG 696
           CFEEP     LPG
Sbjct: 470 CFEEPLPSLPLPG 482


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/48 (18%), Positives = 19/48 (39%)
 Frame = -2

Query: 248 LACNSSFKHLCVFGAKLHIIASVPCQIKLSNNTRYCTSMFIVVIYYLS 105
           L C +S   LC      ++  + P        ++    + IV ++ L+
Sbjct: 120 LLCTASILSLCAISIDRYLAVTQPLIYSRRRRSKRLAGLMIVAVWVLA 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,503
Number of Sequences: 438
Number of extensions: 4424
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)