Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0284
         (741 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15046| Best HMM Match : IlvB_leader (HMM E-Value=4.4)               29   3.0  
SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17)               28   9.1  

>SB_15046| Best HMM Match : IlvB_leader (HMM E-Value=4.4)
          Length = 123

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 196 WLIDLKKKKIGTQSSRMCIFTINFKIYDVTFVLYFIYTNQ 315
           WLI   K K+  +++R C+FT+   +  + FVL   Y NQ
Sbjct: 25  WLI---KNKLSVKNTRRCVFTVGCTVASI-FVLATGYANQ 60


>SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17)
          Length = 1426

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 15   KMKTSRDEHSNKKKKKNDHFTHFTNLLAAQVPPVMKDCFHD 137
            + K   D+ ++KK+K  D F  FTN L+A   PVM D   D
Sbjct: 1247 EFKKVADDVTSKKRKVTD-FDRFTNKLSAD--PVMDDVSRD 1284


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,850,078
Number of Sequences: 59808
Number of extensions: 326418
Number of successful extensions: 573
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)