Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0284
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81038-7|CAB02764.1|  453|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF039569-1|AAB99999.1|  451|Caenorhabditis elegans aryl hydrocar...    31   1.1  
U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>Z81038-7|CAB02764.1|  453|Caenorhabditis elegans Hypothetical
           protein C25A1.11 protein.
          Length = 453

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 6   GTPKMKTSRDEHSNKKKKKNDHFTHFTNLLAAQVP 110
           G  K + +R+ HS  ++++ +  TH+ N LA  VP
Sbjct: 38  GENKERFARENHSEIERRRRNKMTHYINELAEMVP 72


>AF039569-1|AAB99999.1|  451|Caenorhabditis elegans aryl hydrocarbon
           receptor nucleartranslocator ortholog AHA-1 protein.
          Length = 451

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 6   GTPKMKTSRDEHSNKKKKKNDHFTHFTNLLAAQVP 110
           G  K + +R+ HS  ++++ +  TH+ N LA  VP
Sbjct: 38  GENKERFARENHSEIERRRRNKMTHYINELAEMVP 72


>U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical
           protein K03C7.3 protein.
          Length = 191

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 430 RFSASLV*CND*CAVLIPFFFSY**VNLAMSILCTHFKSESQNKLFV-KQIK*LKIKLFP 606
           RF  S +  +  C++L  FF S+  ++   S LCT+  + S   +FV K+ K   +K+ P
Sbjct: 41  RFFLSFLSFSTCCSILGWFFLSHSTMHTYFSFLCTNSTNISPPNVFVGKEEKDPSLKMLP 100

Query: 607 L 609
           +
Sbjct: 101 I 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,709,397
Number of Sequences: 27780
Number of extensions: 275128
Number of successful extensions: 486
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)