Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0283
         (733 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25773| Best HMM Match : 7tm_1 (HMM E-Value=1.68156e-44)             28   6.8  
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)               28   9.0  

>SB_25773| Best HMM Match : 7tm_1 (HMM E-Value=1.68156e-44)
          Length = 906

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 276 TLKPILHHANNGEQLFKHIHINKFY--AKYNTKKKYICNLIFVQYRLLLFPY 127
           T + IL H +   Q FK  ++   +   K  T   + C LIFV YR L+  Y
Sbjct: 227 TRRDILFHTSRMRQEFKIKNVKLDFPDVKSFTTSPWFCQLIFVIYRTLVALY 278


>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
          Length = 599

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -2

Query: 222 IHINKFYAKYNTKKKYICNLIFVQYRLLL 136
           +H+NK   K+N     I ++IF++Y+ +L
Sbjct: 511 MHVNKLMLKFNPSYNKIDSIIFLRYQTML 539


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,317,852
Number of Sequences: 59808
Number of extensions: 400587
Number of successful extensions: 608
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)