Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0283
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81534-5|CAB04348.2|  694|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81140-4|CAJ55247.1|  463|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81140-3|CAJ55246.1|  453|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z67755-6|CAA91759.1|  311|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z47074-2|CAA87377.2|  694|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z68006-1|CAA91998.1|  251|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z81534-5|CAB04348.2|  694|Caenorhabditis elegans Hypothetical
           protein F37H8.2 protein.
          Length = 694

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -2

Query: 303 LHIQFKVSYTLKPILHHANNGEQLFKHIHINKFYAKYNTKKKYIC 169
           L I     + LK +   AN  E  F   H +KF+  Y  K  Y C
Sbjct: 353 LQISTAAEHELKEL--SANEIELFFNEEHTSKFFGNYGQKSMYTC 395


>Z81140-4|CAJ55247.1|  463|Caenorhabditis elegans Hypothetical
           protein W10G6.2b protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 312 LLRLHIQFKVSYTLKPILHHANNGEQLFKHIHINKFYAKYNTK 184
           L+ LH  F+    L  +L H N GE LF H+   K +++  ++
Sbjct: 196 LVSLHFSFQNKEKLYFVLDHLNGGE-LFSHLQREKHFSESRSR 237


>Z81140-3|CAJ55246.1|  453|Caenorhabditis elegans Hypothetical
           protein W10G6.2a protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 312 LLRLHIQFKVSYTLKPILHHANNGEQLFKHIHINKFYAKYNTK 184
           L+ LH  F+    L  +L H N GE LF H+   K +++  ++
Sbjct: 186 LVSLHFSFQNKEKLYFVLDHLNGGE-LFSHLQREKHFSESRSR 227


>Z67755-6|CAA91759.1|  311|Caenorhabditis elegans Hypothetical
           protein F54F7.6 protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 111 SSDYNHTGTKVVCIVQILSYKCIFFLYCIWH 203
           SSD N    K+  I+ I  +  +F LYC W+
Sbjct: 271 SSDSNDQFKKIGSIIAIGLFAVVFLLYCCWN 301


>Z47074-2|CAA87377.2|  694|Caenorhabditis elegans Hypothetical
           protein F37H8.2 protein.
          Length = 694

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -2

Query: 303 LHIQFKVSYTLKPILHHANNGEQLFKHIHINKFYAKYNTKKKYIC 169
           L I     + LK +   AN  E  F   H +KF+  Y  K  Y C
Sbjct: 353 LQISTAAEHELKEL--SANEIELFFNEEHTSKFFGNYGQKSMYTC 395


>Z68006-1|CAA91998.1|  251|Caenorhabditis elegans Hypothetical
           protein K09C8.2 protein.
          Length = 251

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 75  SIHLGNCLKFAASSDYNHTGTKVVCIVQILS 167
           S H+GN   +A S  + H G   VCIV +LS
Sbjct: 47  SFHVGNDF-YAVSVSFVHVGAVFVCIVILLS 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,961,922
Number of Sequences: 27780
Number of extensions: 332142
Number of successful extensions: 659
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)