Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0282
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81054-6|CAE17756.1|  412|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AF016430-3|AAB65369.1|  370|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z93385-9|CAB07642.1|  843|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z81083-7|CAB03105.1|  843|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U67952-1|AAB07577.2|  414|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL132943-12|CAB81978.3|  514|Caenorhabditis elegans Hypothetical...    29   4.4  

>Z81054-6|CAE17756.1|  412|Caenorhabditis elegans Hypothetical
           protein F01D4.9 protein.
          Length = 412

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -3

Query: 707 FEKKKYGYNYCLHIN*TQILKRIRNIINRYVSIIMYLTSLHIFLQLE 567
           +E KKYG ++C+  N T+     R+     +S++++ TS H   ++E
Sbjct: 56  YESKKYGSDFCVAYNVTKATGNFRDDGLEPISLVLHATS-HFMREIE 101


>AF016430-3|AAB65369.1|  370|Caenorhabditis elegans Hypothetical
           protein C05C8.2 protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = +1

Query: 31  YIIIPAREIIKLYFRLCNNFQI*KQLNNVFYFECS*KSSLVLNLENW 171
           YII+ ARE+IKL  R     Q  + L +  Y E    SS+V N E +
Sbjct: 116 YIIMKAREVIKLLSRSVPYEQAIRVLEDEIYCEIIKISSMVRNKERF 162


>Z93385-9|CAB07642.1|  843|Caenorhabditis elegans Hypothetical
           protein F44F1.7 protein.
          Length = 843

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 19  LHNSYIIIPAREIIKLYFRLCNN 87
           LHN Y+ +P+ ++  LY   CNN
Sbjct: 814 LHNGYMELPSAKVYTLYAMRCNN 836


>Z81083-7|CAB03105.1|  843|Caenorhabditis elegans Hypothetical
           protein F44F1.7 protein.
          Length = 843

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 19  LHNSYIIIPAREIIKLYFRLCNN 87
           LHN Y+ +P+ ++  LY   CNN
Sbjct: 814 LHNGYMELPSAKVYTLYAMRCNN 836


>U67952-1|AAB07577.2|  414|Caenorhabditis elegans Hypothetical
           protein F39B3.2 protein.
          Length = 414

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 289 IDSYFVAI*CSKNFWYFFVF 348
           I ++ + + CS NFW FFV+
Sbjct: 317 ISNFLIVLNCSSNFWVFFVW 336


>AL132943-12|CAB81978.3|  514|Caenorhabditis elegans Hypothetical
           protein Y116F11B.9a protein.
          Length = 514

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 713 LCFEKKKYGYNYCLHIN*TQILKRIRNIINRYVSIIMYLTS 591
           +C  +K++G   C+H+N T +L +  N I  Y +   Y TS
Sbjct: 468 MCKFQKRWGVQ-CVHVNATHVLMKKLNPITYYYASDPYFTS 507


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,576,301
Number of Sequences: 27780
Number of extensions: 318668
Number of successful extensions: 764
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)