Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0281
         (661 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0697 + 26371193-26371397,26371562-26374254                       28   5.7  
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497...    28   7.6  

>11_06_0697 + 26371193-26371397,26371562-26374254
          Length = 965

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 562 YCNIYSEELNLYHIIVTR 615
           YC++Y E+ N+YH  +TR
Sbjct: 377 YCSVYPEDANIYHDDLTR 394


>09_04_0695 -
           19547101-19548010,19548089-19548587,19549461-19549728,
           19551025-19551687,19551849-19552060,19552203-19552593,
           19552659-19553107,19553454-19553790
          Length = 1242

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 490 YVHRQSKKKKNHLHQKRNT 434
           ++H  S+++KNH+HQ   T
Sbjct: 745 HIHANSRRRKNHIHQLHTT 763


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,710,471
Number of Sequences: 37544
Number of extensions: 253986
Number of successful extensions: 696
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)