Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0281
         (661 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2260| Best HMM Match : No HMM Matches (HMM E-Value=.)               35   0.067
SB_21717| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.64)             30   1.9  
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_44777| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.4  
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)                   29   3.4  
SB_58392| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.2e-24)       28   5.9  

>SB_2260| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 502

 Score = 34.7 bits (76), Expect = 0.067
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = -1

Query: 610 LQLYGTNSTL--HYIYYSIKAFCITIIVHPCGTRSLAHYIQHYVH-RQSKKKKNHLHQKR 440
           L  Y T  TL  HY YY+ +   +    +   T S A ++ HY H +++ +  N+ H KR
Sbjct: 210 LYTYYTTRTLSVHYTYYTTRTLSVHFTYYTTRTLSRALHVLHYTHTKRALQVLNYTHTKR 269


>SB_21717| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.64)
          Length = 499

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
 Frame = -1

Query: 610 LQLYGTNSTLHYIYYSIKAFCITIIVHPCGTR------SLAHYIQHYVHR-QSKKKKNHL 452
           L +YG+N  +    ++I+     ++V PCG R       +A+ ++H   + Q+   KN L
Sbjct: 158 LVVYGSNGEIIQGIHAIRG---RVVVIPCGYRFTLKPPGMANSLRHRTLKIQASASKNPL 214

Query: 451 HQKRNTLY 428
           H  RN+ Y
Sbjct: 215 HSPRNSTY 222


>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2388

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = -1

Query: 589  STLHYIYYSIKAFCITIIVHP-CGTRSL--AHYIQHYVHRQSKKKKNHLHQKRNTLY 428
            + L  +Y  +   C+T +V   C +R +  +H  +H + + S++ K HL     TLY
Sbjct: 1357 AALFSLYIDLVLVCMTSLVEKLCLSRKMTSSHVTKHLIDKMSEEDKEHLLDDTITLY 1413


>SB_44777| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 641

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -3

Query: 473 EEKKKPFTSKA*HIILISSRLYIKIYKRIYTGRTDIFLNNL 351
           E  KK    K+    + + R YIK+ K+IYT RT +  ++L
Sbjct: 85  ENSKKNGNYKSGKTTVNTDRWYIKLLKKIYTTRTGMLCSSL 125


>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
          Length = 2200

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 489 TYIDNRRKKKTIYIKSVTHYINI-LPSIHKNLQKDL 385
           TY+   R K    IK + HY+N+ LP++ K  + +L
Sbjct: 785 TYVKETRPKIEAKIKKIVHYMNVTLPALMKQKRAEL 820


>SB_58392| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.2e-24)
          Length = 1064

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = -1

Query: 610 LQLYGTNSTLHYIYYSIKAFCITIIVHPCGTRSLAHYIQHYVHRQSKKKKNHLHQ 446
           L+ +    T H+    ++   + +  H C TR   H +Q   HR   + + H  Q
Sbjct: 737 LRGHAVQVTYHHCCTRLRGHAVQVTYHHCCTRLRGHAVQVTYHRCCTRLRGHAVQ 791


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,789,946
Number of Sequences: 59808
Number of extensions: 322049
Number of successful extensions: 1072
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)