Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0281
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68120-4|CAA92202.1|  328|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AL132876-17|CAC48140.1|  934|Caenorhabditis elegans Hypothetical...    28   6.8  
AF099003-1|AAC68742.1|  440|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z68120-4|CAA92202.1|  328|Caenorhabditis elegans Hypothetical
           protein T24C2.4 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -3

Query: 614 LVTIIWYKFNSSLYILQY*GFLHYYNSPSVRDTITSPLYTTLRT*TIEEKKK 459
           LVT++ YK N+  + L Y     + N+P+ RDT  S L  TL+   I + +K
Sbjct: 119 LVTLLKYKINT--FNLSY---WFFNNNPTFRDTELSKLIETLKKVEIVKARK 165


>AL132876-17|CAC48140.1|  934|Caenorhabditis elegans Hypothetical
           protein Y105E8A.21 protein.
          Length = 934

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 550 CITIIVHPCGTRSLAHYIQHYVHRQSKKKKNHL 452
           C+T   +     S +  +Q + H+  KKKK+HL
Sbjct: 473 CVTTFANDTDLESDSSCVQFWKHKLGKKKKSHL 505


>AF099003-1|AAC68742.1|  440|Caenorhabditis elegans Hypothetical
           protein Y59C2A.2 protein.
          Length = 440

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 287 SMNPPPVPPHTSRIHGTHV 231
           + NPP  PPHT   H  H+
Sbjct: 49  AQNPPNPPPHTQHQHNNHL 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,451,011
Number of Sequences: 27780
Number of extensions: 248416
Number of successful extensions: 734
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)