Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0280
         (756 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      89   5e-18
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      80   2e-15
SB_55238| Best HMM Match : Serpin (HMM E-Value=0)                      69   4e-12
SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)           29   4.1  
SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)                       29   4.1  
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)                 29   5.4  
SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.4  
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)                29   5.4  
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)         28   9.4  
SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  

>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 88.6 bits (210), Expect = 5e-18
 Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
 Frame = +3

Query: 183 SAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANK 362
           S  S++  LA   L + G T  ++ K   FP D   +     ++ +  +  G ++ MAN+
Sbjct: 33  SPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNASNSDGNQILMANR 92

Query: 363 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPD 539
           ++   G ++ E F   S++ F++++  +D+ KN+  A+ ++N WVE+ T ++IK+L+   
Sbjct: 93  LFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLIPEG 152

Query: 540 SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFLREQRQNNQ 668
             +  T   LVNA+YFKG+W   F+   T    F     Q  Q
Sbjct: 153 MFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQ 195



 Score = 37.9 bits (84), Expect = 0.009
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +1

Query: 640 FYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKG 756
           F  +  + I+V  MY+  +++Y ES+ L  Q++E+PY G
Sbjct: 186 FKTTPSQEIQVQFMYQSSEFRYLESSTLGCQIVELPYAG 224


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 5/169 (2%)
 Frame = +3

Query: 207 LAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD---LRSIKGV-ELKMANKVYVH 374
           L  + L S G T  ++    G+ + +   T    K      L S  G  E+++ NK++ H
Sbjct: 5   LGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIWGH 64

Query: 375 DGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 551
           D  ++ E F   +R+ ++S++  +DF +K   A K +N WV + T   IK+L+    ++S
Sbjct: 65  DEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGVINS 124

Query: 552 ATAAVLVNAIYFKGAWSSKFDERLTSDRDFLREQRQNNQSTHDV*TRRL 698
            T  ++VNA+YFKG W  +F E  T    F   +   ++   ++ TR++
Sbjct: 125 LTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRKM 173


>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 345

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
 Frame = +3

Query: 342 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNNRI 518
           E+ +AN +++     + + F  + +  +++D+  +D+  +   A K +N WVEE T  +I
Sbjct: 49  EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108

Query: 519 KDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 641
            DL+ P   +  T   LVNAIYFKG W   F +  +   +F
Sbjct: 109 CDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEF 149



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +1

Query: 640 FYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY 750
           F  +    ++V MM+++  +KY  S     +L+E+PY
Sbjct: 149 FRTTSSNEVEVEMMFQKSKFKYLHSDKYKCKLLELPY 185


>SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)
          Length = 257

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 394 RILQSFPGTSSIRTSKTLISRRIQSQLS 477
           R+  SFPG S      TL++R  QSQ+S
Sbjct: 65  RLYDSFPGASRSEAESTLLARMRQSQVS 92


>SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)
          Length = 641

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 384 KLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDW---VEENTNNRIKD 524
           K +E+  + S  +F+ + +N+DFS +     ++ DW   VE    N ++D
Sbjct: 460 KFEEDLRISS--MFSGEGENVDFSTDLYPTGNVEDWLLEVENTMRNSLRD 507


>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
          Length = 595

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +3

Query: 69  AMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDG 236
           +MAAV   + +L+  +      + + ++KNN  +S+   AF+ L  L  L L+S+G
Sbjct: 36  SMAAVCRPAGLLEPDHFALPVAVESLILKNNSIRSIAKGAFNGLDKLLTLDLSSNG 91


>SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 640

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 77  CHCRDGDSKQTNDCL 33
           CHCRDG+S Q N+ +
Sbjct: 336 CHCRDGESVQVNNAM 350


>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
          Length = 2293

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
 Frame = +3

Query: 348 KMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEEN---TNNRI 518
           ++ NK   +D  KLDE     +  V N D Q I     TV  K   D ++E+   T++ I
Sbjct: 552 RIENKKPTNDYEKLDEEDNRSNSGVNNKDWQEIHEYDKTVPKKGEEDKIDEHREGTSDNI 611

Query: 519 KDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDE----RLTSDRDFLREQRQNNQSTHD 680
           K     +    A   +  N    K   S K+DE    R  SD    +++ QN + T D
Sbjct: 612 KSNHGKEK-DRAQLDLTGNDNKNKNKESKKYDEQGDSRPVSDMS-NKDRHQNQKKTGD 667


>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
          Length = 672

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 234 HQKLKLTEREEAAPKMPRGQRFSL 163
           HQ L + E + ++PK PR  +F L
Sbjct: 56  HQNLSINEMDSSSPKRPRQHQFGL 79


>SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 345

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 234 HQKLKLTEREEAAPKMPRGQRFSL 163
           HQ L + E + ++PK PR  +F L
Sbjct: 21  HQNLSINEMDSSSPKRPRQHQFGL 44


>SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 234 HQKLKLTEREEAAPKMPRGQRFSL 163
           HQ L + E + ++PK PR  +F L
Sbjct: 50  HQNLSINEMDSSSPKRPRQHQFGL 73


>SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 132

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 234 HQKLKLTEREEAAPKMPRGQRFSL 163
           HQ L + E + ++PK PR  +F L
Sbjct: 21  HQNLSINEMDSSSPKRPRQHQFGL 44


>SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 454

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 711 LSIFIIAAFIHHGYFDCF 658
           LS++++   +HH YF CF
Sbjct: 298 LSLYVVVVTVHHHYFFCF 315


>SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 118

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 234 HQKLKLTEREEAAPKMPRGQRFSL 163
           HQ L + E + ++PK PR  +F L
Sbjct: 7   HQNLSINEMDSSSPKCPRQHQFGL 30


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,355,664
Number of Sequences: 59808
Number of extensions: 427134
Number of successful extensions: 1371
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)