Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0280
(756 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 83 1e-16
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 82 4e-16
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 80 1e-15
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 73 2e-13
At1g64030.1 68414.m07252 serpin family protein / serine protease... 73 3e-13
At1g62170.1 68414.m07013 serpin family protein / serine protease... 69 3e-12
At2g14540.1 68415.m01628 serpin family protein / serine protease... 67 1e-11
At2g35580.1 68415.m04357 serpin family protein / serine protease... 61 7e-10
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 59 4e-09
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 55 4e-08
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.4
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 2.5
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 29 2.5
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 2.5
At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containi... 29 4.4
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 4.4
At5g01060.1 68418.m00009 protein kinase family protein contains ... 28 5.8
At2g43210.2 68415.m05371 UBX domain-containing protein contains ... 28 5.8
At2g43210.1 68415.m05370 UBX domain-containing protein contains ... 28 5.8
At2g34610.1 68415.m04252 expressed protein 28 7.7
At2g32620.1 68415.m03982 cellulose synthase family protein simil... 28 7.7
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 28 7.7
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 83.4 bits (197), Expect = 1e-16
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Frame = +3
Query: 90 LSNVLKNGNDNFTARMFTEVVKNNP--GKSVVLSAFSVLPPLAQLALASDGETHEELLKA 263
L ++N N N AR+ +V++ + G +VV S S+ L+ +A S+ T EE+L
Sbjct: 3 LGKSIENQN-NVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSF 61
Query: 264 IGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQN 443
+ P D + A + + L A+ V++ L +F + + + +
Sbjct: 62 LMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQ 121
Query: 444 IDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSA-----TAAVLVNAIYFKGAWSS 605
+DF+ V +N W + +TN IK +++ D + + +L NA+YFK AWS
Sbjct: 122 VDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVYFKAAWSR 181
Query: 606 KFDERLTSDRDF 641
KFD +LT D DF
Sbjct: 182 KFDAKLTKDNDF 193
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 81.8 bits (193), Expect = 4e-16
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 8/167 (4%)
Frame = +3
Query: 165 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE 344
G ++V S S+ L +A S+ T E++L I P D + A K+ + G+E
Sbjct: 28 GSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLA-KTVSVALNDGME 86
Query: 345 -----LKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS-KNTVAAKSINDWVEENT 506
L A V++ +F + + +N+ +DF+ K +N W E +T
Sbjct: 87 RSDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHT 146
Query: 507 NNRIKDLVNPDSLSSATAAVLV--NAIYFKGAWSSKFDERLTSDRDF 641
N IK++++ DS+ + ++L+ NA+YFKGAWS KFD +LT DF
Sbjct: 147 NGLIKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDF 193
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 80.2 bits (189), Expect = 1e-15
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 6/180 (3%)
Frame = +3
Query: 120 NFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTE 299
N + T V +N+ +V+ S S+ L+ +A S G T +++L + F D + +
Sbjct: 16 NLAKHVITTVSQNS---NVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNS- 71
Query: 300 FASKS-----RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKN 461
F+S+ D + G +L +AN ++ +F + D + + DF SK
Sbjct: 72 FSSEIVSAVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKA 131
Query: 462 TVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 641
+N W E+ TN I +++ S S T + NA+YFKG W+ KFDE LT + +F
Sbjct: 132 VEVIAEVNSWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEF 191
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 73.3 bits (172), Expect = 2e-13
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Frame = +3
Query: 339 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNR 515
+ L +AN V++ L +F + + + + +DF SK + +N W E +TN
Sbjct: 25 LRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGL 84
Query: 516 IKDLVNPDSLSS--ATAAVLVNAIYFKGAWSSKFDERLTSDRDF 641
IK +++ DS+ + ++ VL NA+YFKGAWSSKFD +T DF
Sbjct: 85 IKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDF 128
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 72.5 bits (170), Expect = 3e-13
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Frame = +3
Query: 171 SVVLSAFSVLPPLAQLALASDGE-THEELLKAIGFPDDDAIRTEFASKSR----DLRSIK 335
+V+ S S+ + A G+ ++L + D ++T F + D +
Sbjct: 30 NVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFRELASVVYADRSATG 89
Query: 336 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNN 512
G ++ AN +++ D F + + F + +DF S+ K +N WVE +TNN
Sbjct: 90 GPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHHTNN 149
Query: 513 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 641
IKDL+ S++S T + NA+ FKGAW F++ T D DF
Sbjct: 150 LIKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDF 192
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 69.3 bits (162), Expect = 3e-12
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Frame = +3
Query: 54 TIAIAAMAAVTNLS--NVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQL 218
T + A +++N+ +K ND T + + V KN+ + V S S+ L +
Sbjct: 50 TDLVIASPSLSNIDVGEAMKKQNDVAIFLTGIVISSVAKNS---NFVFSPASINAALTMV 106
Query: 219 ALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE--LKMANKVYVHDGGKLD 392
A +S GE EEL I + E + R++ S+ V+ K K+ V +G +D
Sbjct: 107 AASSGGEQGEELRSFILSFLKSSSTDELNAIFREIASVVLVDGSKKGGPKIAVVNGMWMD 166
Query: 393 ENFAV--VSRDVF----NSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 551
++ +V +S+D+F ++ +DF SK +N W +TN IKDL+ S++S
Sbjct: 167 QSLSVNPLSKDLFKNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLIKDLLPRGSVTS 226
Query: 552 ATAAVLVNAIYFKGAWSSKFDERLTSDRDF 641
T V +A+YFKG W K+ + +T + F
Sbjct: 227 LTDRVYGSALYFKGTWEEKYSKSMTKCKPF 256
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 67.3 bits (157), Expect = 1e-11
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Frame = +3
Query: 87 NLSNVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEEL- 254
++ +KN N+ ++ + V KN+ + V S S+ L A +D +T
Sbjct: 30 DMQEAMKNQNEVSLLLVGKVISAVAKNS---NCVFSPASINAVLTVTAANTDNKTLRSFI 86
Query: 255 ---LKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDV 422
LK+ + +AI E AS +D G ++ N V++ + ++ + +
Sbjct: 87 LSFLKSSSTEETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNF 146
Query: 423 FNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 599
F + +DF + +N W +TN+ IK+++ S++S T + NA+YFKGAW
Sbjct: 147 FKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAW 206
Query: 600 SSKFDERLTSDRDF 641
FD+ +T D+ F
Sbjct: 207 EKAFDKSMTRDKPF 220
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 61.3 bits (142), Expect = 7e-10
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Frame = +3
Query: 207 LAQLALASDGETHE-----ELLKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVY 368
L+ +A +S G+T LL+A A+ +E + D + G + AN ++
Sbjct: 40 LSIIAASSPGDTDTADKIVSLLQASSTDKLHAVSSEIVTTVLADSTASGGPTISAANGLW 99
Query: 369 VHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLV--NPD 539
+ ++ +F + + + + +DF +K + +N WVE+ TN I +L+ NP
Sbjct: 100 IEKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTNGLITNLLPSNPK 159
Query: 540 SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 641
S + T + NA++F G W S+FD LT D DF
Sbjct: 160 S-APLTDHIFANALFFNGRWDSQFDPSLTKDSDF 192
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +3
Query: 474 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 641
+ +N W ++TN I DL+ S+ S T V NA+YFKGAW +KFD+ T D +F
Sbjct: 14 QELNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEF 69
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +3
Query: 480 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 641
+N W +TN IK+L+ P S+++ T + NA+YFKGAW +KF + +T + F
Sbjct: 39 VNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPF 92
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 185 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDG 78
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 209 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 96
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = +3
Query: 372 HDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVN----PD 539
HD DE + ++++N+ FS+N+ A ++ DW E T + D + +
Sbjct: 262 HDNDSADETSNASTMKHDEANLKNL-FSRNSTAVDNVTDWHELITEYGLLDQSSFQEKVE 320
Query: 540 SLSSATAAVLVNAIYFKGAWSSKFDERLT-SDRDFLREQRQNNQSTH 677
LSS + G S +RL SDR F ++ + TH
Sbjct: 321 RLSSTNGDAATGTVTRGGISSGVGIQRLDGSDRKFQELTIESIKKTH 367
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 144 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 257
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 511
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 84 TNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA 263
T +S +NGN + +MF + K+ K ++ SVLP A L G E +
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 264 IGFPDD 281
GF D+
Sbjct: 244 NGFFDN 249
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 182 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 90
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g01060.1 68418.m00009 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 499
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 153 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFA 305
KN P K+ + L P +D + ELL+ +G+ +D+ + EF+
Sbjct: 337 KNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFS 387
>At2g43210.2 68415.m05371 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 346 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 167
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 166 PG 161
G
Sbjct: 195 KG 196
>At2g43210.1 68415.m05370 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 346 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 167
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 166 PG 161
G
Sbjct: 195 KG 196
>At2g34610.1 68415.m04252 expressed protein
Length = 290
Score = 27.9 bits (59), Expect = 7.7
Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Frame = +3
Query: 102 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELL---KAIGF 272
L N T R+ V KN P + V + A + + L KA G
Sbjct: 137 LPNKKAKVTERIIQAVSKNQPRNKAIEKCEPVTEQNVHIIAAKEETCNASNLMNSKAYGR 196
Query: 273 PDDDAIRTEFASKSRDLRSIKG-------VELKMANKVYVHDGGKLDENFAVVSRDVFNS 431
D R SK R + IK + + + VH G K DE ++ N
Sbjct: 197 SKSDKARGSVISKERRRQEIKHRHKSYDRSQSDSSKWMVVHKGKKADEEMEEATKKWENV 256
Query: 432 DVQNIDFSK--NTVAAKSINDWVE 497
++ +FSK N + + D+++
Sbjct: 257 KEESEEFSKMSNEELNRRVEDFIQ 280
>At2g32620.1 68415.m03982 cellulose synthase family protein similar
to Zea mays cellulose synthase-5 [gi:9622882], -4
[gi:9622880], -9 [gi:9622890]
Length = 757
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -3
Query: 307 LANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILA 128
L+ +V + S P+ S S + PS+ + + G TE PG F VN+ A
Sbjct: 627 LSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVL-VNLAA 685
Query: 127 V 125
+
Sbjct: 686 L 686
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 5 HSRDAGHKHEDNHLFVYYRHRGNGSRHKS 91
H D H H+ NH ++ H G+ H S
Sbjct: 312 HDHDHDHHHDHNHDHDHHHHDGHDHHHHS 340
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,947,512
Number of Sequences: 28952
Number of extensions: 299020
Number of successful extensions: 1028
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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