Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0279
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    62   2e-11
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.8  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    24   5.0  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   5.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.7  

>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 62.1 bits (144), Expect = 2e-11
 Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
 Frame = +1

Query: 124 MHKFVALFLIATVIPLKTNANIFGGKCSRQDPNVDACLLRSFNNLVDYLKGGAPEMGIEE 303
           M++ V   L+A ++ L +   +     S+     + C++++  N     +GG P +G+  
Sbjct: 1   MNRLVIFVLLAGLVALGSGIKL-PASYSQCKTGDEPCVVQAITNTFQKFQGGVPALGLAS 59

Query: 304 AEPIVIDELSIALGAGPDGYRATFKDIHASGASNMTITNVRSDLET-HQFQLTLYGPHIS 480
            +P+ IDE+ I  G GP      FK++  +G  ++ +   +   ET +  ++ L  P  S
Sbjct: 60  LDPLRIDEMDIVQGTGPVNIVLNFKNVDITGFKDVAVKKAKGFTETPNVMEMNLRLPVAS 119

Query: 481 ARARYRSSGVLLLVRASGGGEYWGEYHGVKAKVYFRGAPYER-DGRTYLKLQQLKLDF 651
               Y+  G +L++   G G            + + GA  +R +G+ Y ++ ++K  F
Sbjct: 120 LVGSYKIKGKVLILPIQGEGTSNMTMVNCDFLMKWNGALEKRANGKEYYQMNKIKATF 177


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 364 RATFKDIHASGASNMTITNVRSDLETHQFQLTLYGPH 474
           RAT K++H     N    + +   + H + LT +G H
Sbjct: 330 RATSKNVHECKPCNCNGYSTKCFFDRHLYNLTGHGGH 366


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
 Frame = +1

Query: 109 VKKIRMHKFVALFLIATVI-----PLKTNANIFGGKCSRQDPNVDACLLRSFNNL 258
           +++ R   +VA  L+   I     P  T ANIFGGK   Q    D  L    N L
Sbjct: 1   MERDRSSSYVAAALLLVCISLASAPRGTEANIFGGKL-YQKAQQDCILFMGINPL 54


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 557 YSPQYSPPPEALTSSRTPEERYRARA 480
           Y PQ+ P PE     R   E  R RA
Sbjct: 400 YDPQHYPEPERFDPDRFTPEGCRQRA 425


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 426  VGPRDPSVPADAVRTSHQRPRSVP 497
            +GP+    P  A    HQ+P S P
Sbjct: 1370 IGPKSADQPGAAAGLHHQQPSSPP 1393


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 14/52 (26%), Positives = 20/52 (38%)
 Frame = +3

Query: 318  DRRTVYSPRSWSRRLQSNLQRHPCVRSIEHDHH*RQVGPRDPSVPADAVRTS 473
            ++  V  PR    R +  L        + H HH    G   P  PA+A  +S
Sbjct: 1291 EKEFVVMPRLPPSRSEDTLNSSHLHHHLHHGHHHHHGGEGVPMGPANAAPSS 1342


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,045
Number of Sequences: 2352
Number of extensions: 13924
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)