BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0277
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000241-1|AAH00241.1| 242|Homo sapiens mitochondrial ribosomal... 93 5e-19
AK222995-1|BAD96715.1| 242|Homo sapiens mitochondrial ribosomal... 93 5e-19
BC071731-1|AAH71731.1| 328|Homo sapiens ATP synthase mitochondr... 33 1.1
BC018781-1|AAH18781.1| 328|Homo sapiens ATP synthase mitochondr... 33 1.1
BC008498-1|AAH08498.1| 328|Homo sapiens ATP synthase mitochondr... 33 1.1
AL593856-2|CAI16978.1| 328|Homo sapiens ATP synthase mitochondr... 33 1.1
AL136373-1|CAI14761.1| 328|Homo sapiens ATP synthase mitochondr... 33 1.1
AK026004-1|BAB15316.1| 328|Homo sapiens protein ( Homo sapiens ... 33 1.1
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 3.3
M31315-1|AAA70225.1| 612|Homo sapiens F12 protein. 31 4.3
M17466-1|AAB59490.1| 615|Homo sapiens coagulation factor XII pr... 31 4.3
M11723-1|AAA51986.1| 602|Homo sapiens F12 protein. 31 4.3
AF538691-1|AAM97932.1| 615|Homo sapiens coagulation factor XII ... 31 4.3
AB095845-1|BAC23095.1| 615|Homo sapiens coagulation factor XII-... 31 4.3
L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C larg... 30 5.7
CR533508-1|CAG38539.1| 473|Homo sapiens MGC8407 protein. 30 7.6
BC089428-1|AAH89428.1| 1192|Homo sapiens PLEKHG1 protein protein. 30 7.6
AL450339-2|CAI12939.1| 1385|Homo sapiens pleckstrin homology dom... 30 7.6
AL035086-3|CAI42790.1| 1385|Homo sapiens pleckstrin homology dom... 30 7.6
AB033035-1|BAA86523.1| 1113|Homo sapiens KIAA1209 protein protein. 30 7.6
>BC000241-1|AAH00241.1| 242|Homo sapiens mitochondrial ribosomal
protein S7 protein.
Length = 242
Score = 93.5 bits (222), Expect = 5e-19
Identities = 50/128 (39%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
Frame = +1
Query: 166 DYYQNPIFRKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNK 345
+YY+ P+ ++ K + + LK + P +TSSV+ DP+++K N +M GNK
Sbjct: 49 EYYRKPVEELTEEEKYVRE--LKKTQLIKAAP--AGKTSSVFEDPVISKFTNMMMIGGNK 104
Query: 346 RLARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPHQE 525
LAR L+ + E +KRKQ E+YH AS EE+A IE NP I ++A++NC+P++ L P +
Sbjct: 105 VLARSLMIQTLEAVKRKQFEKYHAASA-EEQATIERNPYTIFHQALKNCEPMIGLVPILK 163
Query: 526 G--WYHIP 543
G +Y +P
Sbjct: 164 GGRFYQVP 171
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 464 TFYIKPLKIANHCYNYSPIKRGGITYQVPGPITEKRSLFLAIKWLL-ETTDEK 619
T + + LK PI +GG YQVP P+ ++R FLA+KW++ E D+K
Sbjct: 143 TIFHQALKNCEPMIGLVPILKGGRFYQVPVPLPDRRRRFLAMKWMITECRDKK 195
>AK222995-1|BAD96715.1| 242|Homo sapiens mitochondrial ribosomal
protein S7 variant protein.
Length = 242
Score = 93.5 bits (222), Expect = 5e-19
Identities = 50/128 (39%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
Frame = +1
Query: 166 DYYQNPIFRKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNK 345
+YY+ P+ ++ K + + LK + P +TSSV+ DP+++K N +M GNK
Sbjct: 49 EYYRKPVEELTEEEKYVRE--LKKTQLIKAAP--AGKTSSVFEDPVISKFTNMMMIGGNK 104
Query: 346 RLARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPHQE 525
LAR L+ + E +KRKQ E+YH AS EE+A IE NP I ++A++NC+P++ L P +
Sbjct: 105 VLARSLMIQTLEAVKRKQFEKYHAASA-EEQATIERNPYTIFHQALKNCEPMIGLVPILK 163
Query: 526 G--WYHIP 543
G +Y +P
Sbjct: 164 GGRFYQVP 171
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 464 TFYIKPLKIANHCYNYSPIKRGGITYQVPGPITEKRSLFLAIKWLL-ETTDEK 619
T + + LK PI +GG YQVP P+ ++R FLA+KW++ E D+K
Sbjct: 143 TIFHQALKNCEPMIGLVPILKGGRFYQVPVPLPDRRRRFLAMKWMITECRDKK 195
>BC071731-1|AAH71731.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 367 EKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPHQEGWYHIPG 546
EK E IK QI + + A+ A I D+++ ++C L P +EG+ G
Sbjct: 155 EKTAEEIK--QIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLCALPRREGYEFFVG 212
Query: 547 AWT 555
WT
Sbjct: 213 QWT 215
>BC018781-1|AAH18781.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 367 EKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPHQEGWYHIPG 546
EK E IK QI + + A+ A I D+++ ++C L P +EG+ G
Sbjct: 155 EKTAEEIK--QIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLCALPRREGYEFFVG 212
Query: 547 AWT 555
WT
Sbjct: 213 QWT 215
>BC008498-1|AAH08498.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 367 EKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPHQEGWYHIPG 546
EK E IK QI + + A+ A I D+++ ++C L P +EG+ G
Sbjct: 155 EKTAEEIK--QIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLCALPRREGYEFFVG 212
Query: 547 AWT 555
WT
Sbjct: 213 QWT 215
>AL593856-2|CAI16978.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 367 EKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPHQEGWYHIPG 546
EK E IK QI + + A+ A I D+++ ++C L P +EG+ G
Sbjct: 155 EKTAEEIK--QIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLCALPRREGYEFFVG 212
Query: 547 AWT 555
WT
Sbjct: 213 QWT 215
>AL136373-1|CAI14761.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 367 EKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPHQEGWYHIPG 546
EK E IK QI + + A+ A I D+++ ++C L P +EG+ G
Sbjct: 155 EKTAEEIK--QIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLCALPRREGYEFFVG 212
Query: 547 AWT 555
WT
Sbjct: 213 QWT 215
>AK026004-1|BAB15316.1| 328|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22351 fis, clone HRC06325. ).
Length = 328
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 367 EKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPHQEGWYHIPG 546
EK E IK QI + + A+ A I D+++ ++C L P +EG+ G
Sbjct: 155 EKTAEEIK--QIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLCALPRREGYEFFVG 212
Query: 547 AWT 555
WT
Sbjct: 213 QWT 215
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 31.1 bits (67), Expect = 3.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 199 DQVKLIADSDLKNRATVPVKPPTVSETSSVYFDP 300
++V + DS+ + A PV+PP SE S YF P
Sbjct: 538 EEVAMDTDSETSSPAPSPVQPPFFSECSLGYFSP 571
>M31315-1|AAA70225.1| 612|Homo sapiens F12 protein.
Length = 612
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 467 FYIKPLKIANHCYNYSPIKRGGITYQVP-GP 556
+ ++P K+ +HC +SP ++GG +P GP
Sbjct: 84 YCLEPKKVKDHCSKHSPCQKGGTCVNMPSGP 114
>M17466-1|AAB59490.1| 615|Homo sapiens coagulation factor XII
protein.
Length = 615
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 467 FYIKPLKIANHCYNYSPIKRGGITYQVP-GP 556
+ ++P K+ +HC +SP ++GG +P GP
Sbjct: 87 YCLEPKKVKDHCSKHSPCQKGGTCVNMPSGP 117
>M11723-1|AAA51986.1| 602|Homo sapiens F12 protein.
Length = 602
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 467 FYIKPLKIANHCYNYSPIKRGGITYQVP-GP 556
+ ++P K+ +HC +SP ++GG +P GP
Sbjct: 74 YCLEPKKVKDHCSKHSPCQKGGTCVNMPSGP 104
>AF538691-1|AAM97932.1| 615|Homo sapiens coagulation factor XII
(Hageman factor) protein.
Length = 615
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 467 FYIKPLKIANHCYNYSPIKRGGITYQVP-GP 556
+ ++P K+ +HC +SP ++GG +P GP
Sbjct: 87 YCLEPKKVKDHCSKHSPCQKGGTCVNMPSGP 117
>AB095845-1|BAC23095.1| 615|Homo sapiens coagulation factor XII-Mie
protein.
Length = 615
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 467 FYIKPLKIANHCYNYSPIKRGGITYQVP-GP 556
+ ++P K+ +HC +SP ++GG +P GP
Sbjct: 87 YCLEPKKVKDHCSKHSPCQKGGTCVNMPSGP 117
>L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C large
subunit protein.
Length = 1148
Score = 30.3 bits (65), Expect = 5.7
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 103 SSTRTLSKLQIRNYAKATSFPDYYQNPIFRKEDQVKLIADSDL-KNRATVPVKPPTVSET 279
SS + SKL I K +S+ + RKE+ +KL ++ K + P K +VS
Sbjct: 311 SSPKASSKLAIMKRKKESSYKEIEPVASKRKENAIKLKGETKTPKKTKSSPAKKESVSPE 370
Query: 280 SSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 384
S +++ +G K L + + K EN
Sbjct: 371 DSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAEN 405
>CR533508-1|CAG38539.1| 473|Homo sapiens MGC8407 protein.
Length = 473
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 64 IFFYRRLKNSSFNSSTRTLSKLQIRNYAKATSFPDYYQNPIFRKE 198
+ +Y RLKNS S L+KL+ + P+Y NP F +E
Sbjct: 151 LVYYNRLKNSKIVISDFHLAKLENGLIKEPCGTPEYLGNPPFYEE 195
>BC089428-1|AAH89428.1| 1192|Homo sapiens PLEKHG1 protein protein.
Length = 1192
Score = 29.9 bits (64), Expect = 7.6
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 205 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 384
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 616 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 670
Query: 385 IKRKQIERYHLASTPE 432
K +R H STPE
Sbjct: 671 SKDDVPDRLHAESTPE 686
>AL450339-2|CAI12939.1| 1385|Homo sapiens pleckstrin homology domain
containing, family G (with RhoGef domain) member 1
protein.
Length = 1385
Score = 29.9 bits (64), Expect = 7.6
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 205 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 384
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 809 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 863
Query: 385 IKRKQIERYHLASTPE 432
K +R H STPE
Sbjct: 864 SKDDVPDRLHAESTPE 879
>AL035086-3|CAI42790.1| 1385|Homo sapiens pleckstrin homology domain
containing, family G (with RhoGef domain) member 1
protein.
Length = 1385
Score = 29.9 bits (64), Expect = 7.6
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 205 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 384
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 809 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 863
Query: 385 IKRKQIERYHLASTPE 432
K +R H STPE
Sbjct: 864 SKDDVPDRLHAESTPE 879
>AB033035-1|BAA86523.1| 1113|Homo sapiens KIAA1209 protein protein.
Length = 1113
Score = 29.9 bits (64), Expect = 7.6
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 205 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 384
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 537 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 591
Query: 385 IKRKQIERYHLASTPE 432
K +R H STPE
Sbjct: 592 SKDDVPDRLHAESTPE 607
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,510,816
Number of Sequences: 237096
Number of extensions: 1726938
Number of successful extensions: 4049
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4049
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -