Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0274
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    30   0.021
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.8  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 29.9 bits (64), Expect = 0.021
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +2

Query: 77  FSKNKAIKKFHFLRVYTSTRTHFFVFMSMIIKSFCLNFI*FNFFVFMSMIIKSF 238
           FSK K IK F F + Y  ++   F   S   KSF +NF  FN ++ + ++  ++
Sbjct: 83  FSKGKVIKSF-FNQGYELSKQEIFNCCSK--KSFRMNFAIFNLYMVLLLLFDAY 133


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 475 PSILNCGNYCLFTSQCE 425
           PSI++ G Y   T +CE
Sbjct: 863 PSIVSLGEYKCVTCKCE 879


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 275 ISRKLHVDHFSKNKAINKF 331
           ISR+L V H   +K +N++
Sbjct: 76  ISRQLRVSHGCVSKILNRY 94


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 361 HTFFFFLNYLHY 396
           HT  +F NY+H+
Sbjct: 150 HTVEYFQNYIHF 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,157
Number of Sequences: 336
Number of extensions: 2972
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)