Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0274
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z72505-2|CAA96609.1|  340|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical protein
            C34F6.9 protein.
          Length = 1181

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 504  RNKITFLNNFKGILL*FPQMYITNNSH*QKAKVCSRSECVFKNLT 638
            RN + +  +   +L+  PQ+Y    SH  K +  +RSEC    LT
Sbjct: 874  RNTLCYAISMVQLLMRVPQVYSIVRSHSHKKQKANRSECFLCMLT 918


>Z72505-2|CAA96609.1|  340|Caenorhabditis elegans Hypothetical
           protein C50C10.3 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 358 THTFFFFLNYLHYSSTNTHLSFPRTGL 438
           T  F+FF N L +     HL+ P +GL
Sbjct: 71  TIMFYFFFNILFFIGDYVHLNLPSSGL 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,129,702
Number of Sequences: 27780
Number of extensions: 253653
Number of successful extensions: 472
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)