Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0272
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   8.1  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   8.1  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    23   8.1  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 246 FLYRSPGTCGPLSFSPDLLSWSRFRSGDRFCEA 344
           FL R PGT  P   S      + FRS D F +A
Sbjct: 231 FLRRFPGTAWPPETSYGSKEINDFRSEDWFIQA 263


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 47  PLLPHLQILTA*NQQ*CLEIVAIHLLGRVTITLCRTLAPPKG 172
           P  P+  I ++     C  +VAI  LG      CR L P KG
Sbjct: 178 PFAPYTSIWSSPTVYICFALVAIMTLGIGGFLSCRQL-PKKG 218


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 536 LVFNGLPGCIQRRTIGTRCCG 474
           +VF   P C + ++IG R CG
Sbjct: 21  MVFAYAPTCARCKSIGARYCG 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,032
Number of Sequences: 2352
Number of extensions: 16746
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)