Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0269
         (745 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YSE5 Cluster: Putative uncharacterized protein; n=2; ...    35   2.4  
UniRef50_Q4U8N7 Cluster: Hypothetical product; n=4; Theileria|Re...    33   9.8  

>UniRef50_Q4YSE5 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 550

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 23/60 (38%), Positives = 30/60 (50%)
 Frame = +3

Query: 318 PILEIICS*YIILVIMKIINHVGSFLLMFSNNLTFCNTLSVKSNIKNILMR*YRRHNISL 497
           P      S +I+L IMKII H   FLL     LT    ++ K N+ NIL   Y  +NI +
Sbjct: 213 PTFNSSTSFFILLQIMKIILH--GFLLYNPPMLTLQQNMNEKKNMNNILFSQYDENNIDV 270


>UniRef50_Q4U8N7 Cluster: Hypothetical product; n=4; Theileria|Rep:
           Hypothetical product - Theileria annulata
          Length = 1022

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -2

Query: 321 LVIMVLFTQITFKVTLKEINATDITRVYYYFLYILSSTCVF-KSQQ*GMLRFVM 163
           L+++ +F  I F   L +  +  +T  + Y LYIL+  C F +++  G++  V+
Sbjct: 321 LILLFVFLPIPFISALDQFISVHLTSAFLYILYILAFLCFFYRTETHGLISMVL 374


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,609,693
Number of Sequences: 1657284
Number of extensions: 10704967
Number of successful extensions: 26258
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26126
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)