Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0267
         (539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    27   0.11 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   6.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.9  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.2  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -3

Query: 114 IFVSIFYISIYCILDHVVW-QILIIGF 37
           I VSIFY+S Y I + ++W +++++ F
Sbjct: 248 IVVSIFYMSAYLISNPIMWDRVMLLTF 274


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 135 KHLFKNLIFVSIFYISIY 82
           ++LFKN  F  +  IS+Y
Sbjct: 127 RNLFKNAYFQLVLSISVY 144


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 433 AESTHHYCGVFTDELLAPLEELAY 504
           A+ST H  G  T ++  P   L+Y
Sbjct: 58  ADSTSHTDGASTPDVRPPSSSLSY 81


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 433 AESTHHYCGVFTDELLAPLEELAY 504
           A+ST H  G  T ++  P   L+Y
Sbjct: 214 ADSTSHTDGASTPDVRPPSSSLSY 237


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 386 PYCRYTAARPKSW 424
           PY +YT    K+W
Sbjct: 250 PYIQYTETETKTW 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,175
Number of Sequences: 336
Number of extensions: 2103
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)