Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0267
         (539 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g31970.1 68417.m04545 cytochrome P450 family protein similar ...    27   8.0  

>At4g31970.1 68417.m04545 cytochrome P450 family protein similar to
           cytochrome P450 82C1 (CYP82C1p)(GI:2739004) [Glycine
           max]; flavonoid 3 ,5'-hydroxylase, Campanula medium,
           PATCHX:D1003951
          Length = 523

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 17/72 (23%), Positives = 29/72 (40%)
 Frame = +1

Query: 253 DLFSKKTAMSKRTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEELERR 432
           DL+S          +  + K  +E MS+   +    GK+Y   GS+ P       +  + 
Sbjct: 161 DLYSLWVKKGGSEPVMVDLKSWLEDMSLNMMVRMVAGKRYFGGGSLSPEDAEEARQCRKG 220

Query: 433 AESTHHYCGVFT 468
             +  H  G+FT
Sbjct: 221 VANFFHLVGIFT 232


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,623,876
Number of Sequences: 28952
Number of extensions: 168020
Number of successful extensions: 393
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1003808112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)