Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0266
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    29   0.042
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   2.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.4  

>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 671 FIVTPITLLYVSQFMHNWGCTGYSYGNCTSRSGLPDNSRVFLGWISICVYRSAIIA 504
           FI+ P+TL  V  FM      G+ +        L  N  +  G++  CV RS  +A
Sbjct: 502 FIIIPVTLTSVCYFMIGLNSHGFRFYIACGIMILVANVAISFGYLISCVSRSVSMA 557


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 768 ISDPSPISDGGEEIKADSPPRRASSCT 688
           + D  P +  G E+K   P   +S CT
Sbjct: 49  LMDEGPCTSEGRELKKTLPDALSSGCT 75


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 129 LRFLVSLLAIIVVPVSYFSSFKRKRKCPP 215
           L  L  LL II  P+S   SF  +  C P
Sbjct: 55  LTLLYKLLGIIQFPISAHFSFMSRFLCLP 83


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 129 LRFLVSLLAIIVVPVSYFSSFKRKRKCPP 215
           L  L  LL II  P+S   SF  +  C P
Sbjct: 11  LTLLYKLLGIIQFPISAHFSFMSRFLCLP 39


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 43  FSATMVLACVLCKR 2
           FS   VLA VLCKR
Sbjct: 76  FSCYTVLAPVLCKR 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,564
Number of Sequences: 336
Number of extensions: 4374
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)