Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0266
(782 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual 52 9e-08
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 36 0.007
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 31 0.25
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 30 0.33
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha... 30 0.43
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.99
SPCC126.15c |sec65||signal recognition particle subunit Sec65 |S... 28 1.3
SPCC1020.08 |||wybutosine biosynthesis protein Tyw1|Schizosaccha... 27 2.3
SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces p... 27 2.3
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 26 5.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 5.3
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 7.0
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 26 7.0
SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces pombe... 26 7.0
SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|c... 26 7.0
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 25 9.3
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.3
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 25 9.3
>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 533
Score = 52.0 bits (119), Expect = 9e-08
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = +3
Query: 243 ATKLADMIRKKQITSEEVVSAFIERCKEVNPYVNAVIEPRYEVALREARGIDKMIKSTDR 422
AT LA+MI+ +++TS E+V+AF +R VN V E YE AL A +D+ T
Sbjct: 60 ATALAEMIKDRKVTSVELVTAFCKRAAIAQQLVNCVNELFYEEALARAAELDEYYAKTGS 119
Query: 423 TPEELEQEYPLLGIPLTIKESIAVE 497
PL G+P+++KE I+++
Sbjct: 120 LVG------PLHGVPVSVKEHISIK 138
Score = 31.1 bits (67), Expect = 0.19
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 710 GGESALISSPPSLIGLGSDMAGSL 781
GGE AL+ S++G+GSD+ GS+
Sbjct: 209 GGEGALLGIKASVLGIGSDIGGSI 232
Score = 30.3 bits (65), Expect = 0.33
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 616 PQLCMNWETYNNVIGVTMNPYDPK 687
PQ M+ ET +N+ GVT+NP++ K
Sbjct: 178 PQAIMHLETSSNLTGVTVNPFNRK 201
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 35.9 bits (79), Expect = 0.007
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 213 PPTNPILFKSAT--KLADMIRKKQITSEEVVSAFIERCKEVNPYVNAVIEPRYEVALREA 386
P I + AT +L + + +TS ++V +++R +VNPYVN +++ +V +
Sbjct: 59 PKCQNITLEDATIDQLQNYMENGILTSTDIVHCYLDRYLQVNPYVNGILQLNPDVLTIAS 118
Query: 387 RGIDKMIKSTDRTPEELEQEYPLLGIPLTIKESIAVE 497
D+ R PL GIP +K++ A +
Sbjct: 119 ELDDERANGIIRG--------PLHGIPFIVKDNFATK 147
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 542 SQERRGYCQASQSGWCNSHS---CNQYTPSCA*TGKHTI 649
SQE++G C ++ C+ C PSC GK T+
Sbjct: 257 SQEKKGCCSTEKTSCCSQEKKSCCTSEKPSCCSNGKSTV 295
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 30.3 bits (65), Expect = 0.33
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 310 INADTTSSDVICFFLIISASLVADLKRMGFV 218
IN DT S DV F++ +AD+ RMG++
Sbjct: 183 INYDTFSEDVTRFYMAECVLAIADVHRMGYI 213
>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 29.9 bits (64), Expect = 0.43
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 710 GGESALISSPPSLIGLGSDMAGSL 781
GGE AL+ S S G+G+D+ GS+
Sbjct: 211 GGEGALLGSGASCCGIGTDIGGSI 234
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.7 bits (61), Expect = 0.99
Identities = 15/71 (21%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +3
Query: 348 VIEPRYEVALREARGIDKMIKSTDRTPEELEQEY-PLLGIPLTIKES-IAVEGMSNDCGT 521
+++ +YE+ + + RG+++ +KS T + L+ E L +P++ ++ + S +
Sbjct: 1212 IMDNKYELTILDNRGLNQQVKSLQSTVDSLQLELNRLQSLPVSNDQTDTPIISGSQEVQL 1271
Query: 522 VYTNRNPAKKD 554
+Y + + +KD
Sbjct: 1272 LYESNSVLRKD 1282
>SPCC126.15c |sec65||signal recognition particle subunit Sec65
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 199
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 153 AIIVVPVSYFSSFKRKRKCPPPTNPILFKSATKLADMIR 269
+II+ P+ + S R+ +C P IL A +AD++R
Sbjct: 3 SIILYPIYFDKSRPRRFRCVPKDKAILNPLAKNIADVVR 41
>SPCC1020.08 |||wybutosine biosynthesis protein
Tyw1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 688
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 536 KSSQERRGYCQASQSGWCNSHSCNQYTPSCA*TGKHT 646
KS+ RG+C SH C + TPS A K T
Sbjct: 326 KSAMRGRGFCYKYSFYGIRSHLCMEATPSLACANKCT 362
>SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 27.5 bits (58), Expect = 2.3
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = +3
Query: 273 KQITSEEVVSAFIERCKEVNPYVNAVIEPRYEVALREARGIDKMIKSTDRTPEELEQEYP 452
+Q+ +SA+ C E ++ V++PR A I + I S ++L++EY
Sbjct: 144 EQVCHHPPISAYFYLCPEYKVRIDGVVKPRSRFLGNSAASIMEGIASIKL--QDLDEEY- 200
Query: 453 LLGIPLTIKESIAVEGMSNDCGTVYTNRNP 542
L+ P I M + G T R P
Sbjct: 201 LITQPNVYARGILFGKMRLELGDHVTVRCP 230
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 26.2 bits (55), Expect = 5.3
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 219 TNPILFKSATKLADMIRKKQITSEEVVSA--FIERCKEVNPYVNAVIEPRYEVALREARG 392
TNP+L SAT++ R+ + E V A + + NP V+ VI V R
Sbjct: 122 TNPVLQGSATEIKPQPRRSRFDRTERVGASLSVSEIQSENPRVD-VIPKDKAVENNHQRN 180
Query: 393 IDKMIKSTDRTPEEL 437
+K + S T +L
Sbjct: 181 AEKPVASDKITDAKL 195
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 5.3
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = -2
Query: 523 TVPQSLLMPSTAILSLIVSGIPNSGYSCSNSSGVRSVDFIILSIPLASLSATSYRGSITA 344
++ S L S+ S + S S S+S+ + S +SLS+T+ S T+
Sbjct: 133 SITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATS 192
Query: 343 FT*GLTSLHRSINADTTSSDV 281
+ +SL+ + +A TSS +
Sbjct: 193 SSLASSSLNSTTSATATSSSL 213
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 7.0
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -2
Query: 469 SGIPNSGYSCSNSSGVRSVDFIILSIPLASLSATSYRGS--ITAFT*GLTSLHRSINADT 296
S IP+S S +SS ++ S PL+S S TS S IT+ + S +A
Sbjct: 39 SVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASL 98
Query: 295 TSS 287
TSS
Sbjct: 99 TSS 101
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 231 LFKSATKLADMIRKKQITSEEVVSAFIERCKEVNPYVNAVIEPRYEVALREARGI 395
L K + ++IRK + +EEVV + E+ PY YE+AL G+
Sbjct: 65 LIKENREEREIIRK--VDNEEVVEKKLWTTYELGPYEYISFNKVYEIALALGSGL 117
>SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 405
Score = 25.8 bits (54), Expect = 7.0
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -1
Query: 353 DYSVYVRINFFTPFYKRRHNLFRCY 279
+Y++Y ++N TP R+++ RC+
Sbjct: 41 NYNLYEKLNVITPVRATRNDMTRCH 65
>SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +3
Query: 174 SYFSSFKRKRKCPPPTNPILFKSATKLADMIRKKQITSEEVVSAFIERCKEVNPYVNAVI 353
+Y + R T P L + ++L+ + R T EE++ A +E E + Y +
Sbjct: 482 NYAFDWSRMTSFEGDTGPYLQYAHSRLSSVRRNVNYTDEEIMGANLELLTEPDAYDLVRL 541
Query: 354 EPRYEVALREA 386
+Y L+ A
Sbjct: 542 LGQYPDVLKNA 552
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 410 LYHFVYSSCFS*RYFIPWFDYSVYVRINFFTPFY 309
L V + CF+ +F W+ S + N PFY
Sbjct: 1172 LVEAVINCCFATLFFFGWYYPSGFYEFNHNIPFY 1205
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 560 YCQASQSGWCNSHSCNQYTPS 622
Y Q+SQS NS+S ++YTP+
Sbjct: 305 YMQSSQSMPVNSYSYDRYTPN 325
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 76 VLGNGAI*ELIFSATMVLAC 17
VLGN LIFS+ ++LAC
Sbjct: 707 VLGNNYFTTLIFSSLLILAC 726
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,282,330
Number of Sequences: 5004
Number of extensions: 69891
Number of successful extensions: 220
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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