Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0266
(782 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30331| Best HMM Match : Amidase (HMM E-Value=0) 84 1e-16
SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_50457| Best HMM Match : Amidase (HMM E-Value=2.6e-36) 31 0.80
SB_32384| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_7476| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_46608| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14) 30 1.8
SB_56012| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_43670| Best HMM Match : DUF827 (HMM E-Value=0.52) 30 2.4
SB_32301| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44) 29 4.2
SB_54251| Best HMM Match : rve (HMM E-Value=0.032) 29 5.6
SB_37851| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_3948| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_50358| Best HMM Match : DSL (HMM E-Value=6.2e-13) 28 9.8
SB_21876| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_4595| Best HMM Match : TSP_1 (HMM E-Value=2.5e-05) 28 9.8
SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_10203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_30331| Best HMM Match : Amidase (HMM E-Value=0)
Length = 555
Score = 84.2 bits (199), Expect = 1e-16
Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = +3
Query: 228 ILFKSATKLADMIRKKQITSEEVVSAFIERCKEVNPYVNAVIEPRYEVALREARGIDKMI 407
+L + L IR +T+EEV+ A+I+R EVNP VNA+ R++ AL EAR ID+++
Sbjct: 67 LLLQPVDALVGNIRDNTVTAEEVMRAYIKRILEVNPMVNAITNDRFDEALEEARRIDEIL 126
Query: 408 KSTDRTPEELE-QEYPLLGIPLTIKESIAVEGMSNDCGTVYTNRNPAKKDXXXXXXXXXX 584
+ + E+ E PLLG+P+T+KESI+ GM + G V ++ D
Sbjct: 127 GNELNSEEKKELLAKPLLGVPITVKESISCRGMPHSSGLVERKNVISEHDSEVVENLRQN 186
Query: 585 XXXPIAVTS 611
P+AVT+
Sbjct: 187 GAIPMAVTN 195
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +1
Query: 619 QLCMNWETYNNVIGVTMNPYDPKR 690
+LCM WET NNV G T NPYD R
Sbjct: 198 ELCMWWETVNNVYGRTRNPYDTSR 221
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 710 GGESALISSPPSLIGLGSDMAGSL 781
GGE A+I++ SL G+GSD+ GS+
Sbjct: 228 GGEGAIIAAAGSLCGVGSDVGGSI 251
>SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 619 QLCMNWETYNNVIGVTMNPYDPKR 690
+LCM WE+ N V G T NP+D R
Sbjct: 40 ELCMWWESANRVYGRTCNPFDTAR 63
>SB_50457| Best HMM Match : Amidase (HMM E-Value=2.6e-36)
Length = 391
Score = 31.5 bits (68), Expect = 0.80
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Frame = +3
Query: 264 IRKKQITSEEVVSAFIERCKEVN--------PYVNAV--IEPRYEVALREARGIDKMIKS 413
I + + + EE++S++I+R K+ N P +NA+ I P A+ A+ +DK+
Sbjct: 22 ISQGKYSCEELISSYIKRIKQYNLSSIDSNKPPINAISSINPN---AIYRAQQLDKIFAK 78
Query: 414 TDRTPEELEQEYPLLGIPLTIKESIAVEGMSNDCGT 521
E L IP+TIK++I + GM G+
Sbjct: 79 NGIVGE-------LFCIPITIKDNIDIIGMETTSGS 107
>SB_32384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +3
Query: 156 IIVVPVSYFSSFKRKRKCPPPTNPILFKSATKLADMIRKKQITSEEVVSAFIERCKEVNP 335
II P ++ K P + +ATK+A +++KK + + A E+ KE
Sbjct: 496 IIQTPSKKETTSKLAEPVTNPVKSVAKATATKVAKVVKKKADLVVKKLKAVAEKLKEALK 555
Query: 336 YVNAVIE-PRYEVALREARGIDKMIKSTDRTPEELEQEYP 452
+ V E P+ VA A+ + K K + + + P
Sbjct: 556 KADPVAEKPKPVVAKAVAKNVAKAAKDVAKKADHAVRAQP 595
>SB_7476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 341 KRCNRTTV*SSAKRSKRNRQNDKVNRSHARRIRTGISTIGNSAY 472
KR R +KR+KRN++N + RS+ T IST N Y
Sbjct: 13 KRDKRNKRNKCSKRNKRNKRNKRKKRSYGGFATTTISTKRNKLY 56
>SB_46608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -2
Query: 472 VSGIPNSGYSCSNSSGV--RSVDFIILSIPLASLSATSYRGSITAFT*GLTSLHRSINAD 299
++ + NS + SNS S+D + SI S S+ SI A + + +L SINA
Sbjct: 79 INALSNSIDALSNSIDAFSNSIDALCNSIDALCNSIDSFCDSIDALSNSIEALCNSINAL 138
Query: 298 TTSSDVIC 275
+ S D +C
Sbjct: 139 SNSIDALC 146
>SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14)
Length = 506
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 111 AFMRRFLRFLVSLLAIIVVPVSYFSSFKRKRKCPPP 218
AF R V LL I+ V + F S +R+R+ PPP
Sbjct: 246 AFSMRVAALAVLLLVIVPVSQAIFWSRRRRRRSPPP 281
>SB_56012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 92 KDSNHERVHEEVSQISRIVAGHHSGAGFIFFKLQTKTEMSPANKSHPLQISN*ASRYDKK 271
K+ N ER+H + ++ VA + GF Q+ ++ S ++SH + S + + K
Sbjct: 182 KNRNKERMHAAIVDVTASVAHIRAQRGFNAEDYQSPSKSSTKSRSHSIASSQNNNHTNPK 241
Query: 272 ETDNIGRG 295
NI G
Sbjct: 242 PGTNISPG 249
>SB_43670| Best HMM Match : DUF827 (HMM E-Value=0.52)
Length = 253
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 332 SLRKRCNRTTV*SSAKRSKRNRQNDKVNRSHARRIR 439
+L+ + T + SS K +R ++DK NRS RR+R
Sbjct: 150 ALQSKTLHTEIDSSMKEYRRKIESDKNNRSELRRVR 185
>SB_32301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = -2
Query: 517 PQSLLMPSTAILSLIVSGIPNSGYSCSNSSGVRSVDFIILSIPLASLSATSYRGSITAFT 338
P S+ P TAIL L V G++C ++ G+ + + + + + S G I AF+
Sbjct: 148 PLSMGSPVTAILGLFVLWWGWLGFNCGSTFGITGEKWQLAARAAVNTLSASIGGGIFAFS 207
Query: 337 *GLTSLHRSIN 305
+R ++
Sbjct: 208 YSYARYNRKVD 218
>SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44)
Length = 591
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +3
Query: 282 TSEEVVSAFIERCKEVNPYVNAVIEPRYEVALREARGIDKMIKSTDRTPEELEQEYPLLG 461
++EE++ + E + + + R EV + GID I T E+LE+E ++
Sbjct: 263 SAEEIIRSNEEEVAKREEKLRKLETKRTEVPENQREGIDTQIAETQSEIEQLERENEVIE 322
Query: 462 IPLTIKESI 488
+++K+ +
Sbjct: 323 ERMSLKDRV 331
>SB_54251| Best HMM Match : rve (HMM E-Value=0.032)
Length = 710
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Frame = +3
Query: 354 EPRYEVAL----REARGIDKMIKST-DRTPEELEQEYPLLGIPLT-----IKESIAVEGM 503
+P Y+ AL R+ G +I + TP+ L + P +G PLT ++ + A E +
Sbjct: 481 KPLYQTALGNTYRKPNGFPTVISQEGESTPQVLLPDLPEMGSPLTMDTEGVETTEATEPV 540
Query: 504 SNDCGTVYTNRN 539
CGT+ T N
Sbjct: 541 PRPCGTLETLGN 552
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Frame = +3
Query: 354 EPRYEVAL----REARGIDKMIKST-DRTPEELEQEYPLLGIPLT-----IKESIAVEGM 503
+P Y+ AL R+ G +I + TP+ L + P +G PLT ++ + A E +
Sbjct: 619 KPLYQTALGNTYRKPNGFPTVISQEGESTPQVLLPDLPEMGSPLTMDTEGVETTEATEPV 678
Query: 504 SNDCGTVYT 530
CGT+ T
Sbjct: 679 PRPCGTLET 687
>SB_37851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 306 FIERCKEVN--PYVNAVIEPRYEVALREARGIDKMIKSTDRTPEELEQE 446
F R K++ P +N VI PRY E +IK R +ELE++
Sbjct: 205 FASRAKKIKNKPEINEVITPRYPPGEGEVLDDASIIKRYKRQIKELEEQ 253
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/79 (29%), Positives = 41/79 (51%)
Frame = +3
Query: 276 QITSEEVVSAFIERCKEVNPYVNAVIEPRYEVALREARGIDKMIKSTDRTPEELEQEYPL 455
Q+TS+E VSA +++ KE A+ + +A ++A IDK+++S + E L+ +
Sbjct: 2808 QVTSQEPVSAILDKVKEQKSDNEALQD---SLAQQQA-VIDKLMQSGESVLENLDDDNEK 2863
Query: 456 LGIPLTIKESIAVEGMSND 512
+ I E A G + D
Sbjct: 2864 QALQDKISELEAGFGSAKD 2882
>SB_3948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 282 TSEEVVSAFIERCKEVNPYVNAVIEPRYEVALREARGIDKMIKSTDRTPEELEQEYPLLG 461
++EEV+ + E + + + R EV + G+D I T E+LE+E +
Sbjct: 785 SAEEVIRSNEEEVAKREEKLRQLETKRKEVPENQREGVDAQIAETQSEIEQLERENEAIE 844
Query: 462 IPLTIKESI 488
+++K+ +
Sbjct: 845 ERMSLKDRV 853
>SB_50358| Best HMM Match : DSL (HMM E-Value=6.2e-13)
Length = 557
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 774 PAISDPSPISDGGEEIKADSPPRRASSCTFRIVRVHRYSYNIIVCFPVH 628
P DP+ D G+ KAD R S TF + V ++VCF V+
Sbjct: 427 PLTDDPNIAGDTGKR-KADITSDRGSLLTFVLTGVGIVLLLVVVCFVVY 474
>SB_21876| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +2
Query: 188 LQTKTEMSPANKSHPLQISN*ASRYDKKETDNIGRGCVCVYRTV*RS*SLRKRCNRTTV* 367
++TK S + H + + + + + +I R C + RS C T
Sbjct: 370 MKTKNVSSEQGRQHKPRRNGDITCFKCNQQGHIARICTAPEKR--RSEMWCSTCRSATHN 427
Query: 368 SSAKRSKRNRQNDKVNR 418
SA R +R RQ DKVN+
Sbjct: 428 DSACRRQRGRQTDKVNQ 444
>SB_4595| Best HMM Match : TSP_1 (HMM E-Value=2.5e-05)
Length = 143
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +3
Query: 141 VSLLAIIVVPVSY--FSSFKRKRKCPPP 218
+++L +++VPVS F S +R+R+ PPP
Sbjct: 6 LAVLLLVIVPVSQAIFWSRRRRRRSPPP 33
>SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 514 AERYTQIEIQPRKTRLLSGKPERLVQFP*L*PVHPQLCMNW-ETYNN 651
A RY + I+P +LL G ++ +F + P H ++ + W Y+N
Sbjct: 426 APRYN-LTIEPSSVKLLQGNTQQAPKFDDVRPTHQRIKVTWSRPYSN 471
>SB_10203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1091
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 282 TSEEVVSAFIERCKEVNPYVNAVIEPRYEVALREARGIDKMIKSTDRTPEELEQEYPLLG 461
++EE+ + E + + + R EV + GID I T E+LE+E ++
Sbjct: 133 SAEEITRSNEEEVAKREEKLRQLETKRTEVPENQREGIDTQIAETQSEIEQLERENEVIE 192
Query: 462 IPLTIKESI 488
+++K+ +
Sbjct: 193 ERMSLKDRV 201
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,840,262
Number of Sequences: 59808
Number of extensions: 545787
Number of successful extensions: 1580
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -