Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0266
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   4.2  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   5.6  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   5.6  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.8  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = +3

Query: 318 CKEV---NPYVNAVIEPRYEVALRE 383
           CK V   +PYV A+  P+Y + L++
Sbjct: 317 CKAVACLDPYVYAISHPKYRLELQK 341


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +3

Query: 300 SAFIERCKEVNPYVNAVIEPRYEVALREA---RGIDKMIKSTDRTPEELEQ 443
           + F +    ++P++ A+  PRY   L++     GI +   ++D T  + E+
Sbjct: 322 AVFAKTVSCIDPWIYAINHPRYRQELQKRCKWMGIHEPETTSDATSAQTEK 372


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +3

Query: 300 SAFIERCKEVNPYVNAVIEPRYEVALREA---RGIDKMIKSTDRTPEELEQ 443
           + F +    ++P++ A+  PRY   L++     GI +   ++D T  + E+
Sbjct: 322 AVFAKTVSCIDPWIYAINHPRYRQELQKRCKWMGIHEPETTSDATSAQTEK 372


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 381 EARGIDKMIKSTDRTPEELEQEYP 452
           E + I+ + +  DR P+E  + YP
Sbjct: 1   ELKQINVIFRHGDRIPDEKNEMYP 24


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 381 EARGIDKMIKSTDRTPEELEQEYP 452
           E + I+ + +  DR P+E  + YP
Sbjct: 16  ELKQINVIFRHGDRIPDEKNEMYP 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,160
Number of Sequences: 438
Number of extensions: 5292
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)