Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0264
         (412 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0510 + 3681369-3681645,3682825-3682886,3683016-3683165,368...    31   0.47 
09_03_0125 - 12531409-12531442,12531577-12531668,12531747-125323...    29   1.9  
07_03_1176 + 24567720-24570932                                         29   1.9  
05_01_0520 - 4492182-4492780,4496886-4497951                           28   3.3  
07_01_0217 + 1620625-1621419,1621982-1622152,1622581-1622865,162...    27   4.4  

>06_01_0510 +
           3681369-3681645,3682825-3682886,3683016-3683165,
           3683776-3683952,3684496-3684711,3684802-3686480,
           3686602-3686667,3686753-3686822,3686909-3687547
          Length = 1111

 Score = 30.7 bits (66), Expect = 0.47
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 132 HLKIHNKIEFEVTCGVY*CLCSNSNHG 212
           +L + + +E EV   VY  +C+NSNHG
Sbjct: 734 YLSLTHDLEVEVAIEVYRSICANSNHG 760


>09_03_0125 -
           12531409-12531442,12531577-12531668,12531747-12532337,
           12532454-12532789,12532899-12533156,12533867-12533971,
           12534625-12534702,12535464-12535542,12535649-12535723,
           12535828-12535946,12536042-12537106
          Length = 943

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +3

Query: 78  NHLRLCYILDTRFQFVLFHLKIH--NKI-EFEVTCGVY*CLCSNSN 206
           N ++L +  +   Q+  FHLK H   K+ E+   C V+  LCS SN
Sbjct: 785 NEIKLVHTWNDFHQYCDFHLKFHCDEKMDEYNSFCNVFNELCSYSN 830


>07_03_1176 + 24567720-24570932
          Length = 1070

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -2

Query: 207 GSSLNTNINKLRTSLRILFYYVFLNETIRTEIVYLIYNKVLSGFSSIVYG 58
           G  + T++  L    R+   + FLN TI TEI  L   KVL   S+++ G
Sbjct: 562 GGEIPTSVKNLPNLERLSLGHNFLNGTIPTEINQLYSLKVLDLSSNLLTG 611


>05_01_0520 - 4492182-4492780,4496886-4497951
          Length = 554

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
 Frame = +3

Query: 231 RFIHY----HYSK*WIILSRQEPSDKRLDSFTLIDP---TKNIHIFPTINR 362
           R +HY    H ++ W++L     SDKR  ++   DP   + + H+F  + +
Sbjct: 350 REVHYILVNHATRQWVVLPESARSDKRQIAYLGFDPAVSSSHFHVFELVEK 400


>07_01_0217 +
           1620625-1621419,1621982-1622152,1622581-1622865,
           1623113-1623262
          Length = 466

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -2

Query: 213 IRGSSLNTNINKLRTSLRILFYYVFLNETIRTEIVYLIYNKVLSGFSSIVY 61
           +RG  + + I+  R +  I F+   LNET+   ++  + N+VL    S+ Y
Sbjct: 411 LRGDKIKSIISAKRVTTPIFFFS--LNETLHLSLMIPMENRVLCFHCSVYY 459


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,634,606
Number of Sequences: 37544
Number of extensions: 145662
Number of successful extensions: 250
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)