Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0264
         (412 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023816-4|CAA19433.2|  344|Caenorhabditis elegans Hypothetical ...    36   0.015
Z78019-1|CAB01456.1|  662|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z71185-7|CAA94907.2|  520|Caenorhabditis elegans Hypothetical pr...    26   9.2  

>AL023816-4|CAA19433.2|  344|Caenorhabditis elegans Hypothetical
           protein T05G11.6 protein.
          Length = 344

 Score = 35.5 bits (78), Expect = 0.015
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = -2

Query: 204 SSLNTNINKLRTSLRILFYYVFLNETIRTEIVYLIYNKVLSGFSSIV 64
           SS N++ N+  T L +LF  +FL  T  TEI+ L++  V  G+ S++
Sbjct: 245 SSANSDSNERFTKLVVLFNVIFLLSTAPTEII-LVFEYVYEGYDSLI 290


>Z78019-1|CAB01456.1|  662|Caenorhabditis elegans Hypothetical
           protein ZK863.4 protein.
          Length = 662

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +3

Query: 123 VLFHLKIHNKIEFEVTCGVY*CLCSNSNHGSRPVTPRFIHYHYSK*WIILSRQEPSDK 296
           V + L +HN+I  E    ++  +  + + GSR         H++K   +LS   P +K
Sbjct: 275 VSYDLSVHNQISVEKASLLHEFIVKDKSKGSRMKNAMMFIVHWAKSNKLLSGDYPEEK 332


>Z71185-7|CAA94907.2|  520|Caenorhabditis elegans Hypothetical
           protein C35A5.5 protein.
          Length = 520

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 189 LCSNSNHGSRPVTPRFIHYHYS 254
           + SNS+H S  VTP+F+   YS
Sbjct: 116 IASNSSHQSVIVTPKFLEESYS 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,334,605
Number of Sequences: 27780
Number of extensions: 154572
Number of successful extensions: 291
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 291
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)