Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0264
         (412 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   2.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   4.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   5.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   9.5  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 315 LIDPTKNIHIFPTINRTFLI 374
           +IDP K +H +PT     L+
Sbjct: 788 IIDPAKAMHHYPTREDNLLV 807


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 376  IMRNVRLIVGKIWIFF 329
            I R   L  GK+W+FF
Sbjct: 991  IKRRPDLEYGKVWLFF 1006


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 353 SWKNMDIFCRI 321
           SWK  D+ CRI
Sbjct: 103 SWKAGDVMCRI 113


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 204 NHGSRPVTPRFIHYHYSK 257
           NH ++   P+ + Y YSK
Sbjct: 307 NHDTQRDNPQILTYKYSK 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,688
Number of Sequences: 438
Number of extensions: 2113
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)