Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0262
(731 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 53 3e-07
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 38 0.008
SB_39326| Best HMM Match : TPR_2 (HMM E-Value=3.5e-05) 34 0.10
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 33 0.18
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 32 0.55
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13) 31 1.3
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 30 1.7
SB_48843| Best HMM Match : V_ATPase_I (HMM E-Value=0) 30 2.2
SB_51642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_57286| Best HMM Match : zf-C2H2 (HMM E-Value=8.1) 29 5.1
SB_4710| Best HMM Match : Bowman-Birk_leg (HMM E-Value=0.78) 29 5.1
SB_54941| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +3
Query: 96 DEPQLAVQLYRRALDILD--ESEGGITDPTPSGELTFANQALKELLDERLRVHNNMAAAQ 269
D P+ AV++ + E ++ + +L N+ KE E+ ++ N AA Q
Sbjct: 4 DNPKSAVEIKEEGNKYFKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQ 63
Query: 270 LKAGAYEAALQAVTRVLSCQPKNAKALYRKSRILSAMGR 386
LK YEAA++ T+ L P + KAL+R+S+ A GR
Sbjct: 64 LKLEKYEAAIKDATKALDIVPNDPKALFRRSQAFEATGR 102
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 37.9 bits (84), Expect = 0.008
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Frame = +3
Query: 6 EEPEHDVLSIAEKMEIGIRRRARGNWWYGRDEPQLAVQLYRRALDILDE---SEGGITDP 176
++ + D + +E+ + + GN + + + ++A + Y++AL LDE S+ +D
Sbjct: 284 KDADIDFSKVELVVEVAEKLKVIGNEQFKQQKYEVAKKKYKKALRYLDEFQNSDSSDSDD 343
Query: 177 TPSGELTFANQA---LKELLDERLRVHNNMAAAQLKAGAYEAALQAVTRVLSCQPKNAKA 347
E + K++ L + N AA +LK Y +A++ L +AKA
Sbjct: 344 EKEEEDETNKKVEDNAKKMAAIALPCYLNSAACKLKLAEYPSAIEDCNEALKLDANSAKA 403
Query: 348 LYRKSR 365
L+R+ +
Sbjct: 404 LFRRGQ 409
>SB_39326| Best HMM Match : TPR_2 (HMM E-Value=3.5e-05)
Length = 187
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +3
Query: 312 RVLSCQPKNAKALYRKSRILSAMGRNPXXXXXXXXXXXXXXXXXXXXXELQRCEQRASRD 491
+VL P N KAL+RK ++L++ G EL+ +R S
Sbjct: 2 QVLQIDPDNVKALFRKGKVLASKGELSEALPLIKKANQLDPNNKTIRAELRSLRKRKSIQ 61
Query: 492 RSVERKLAKRMLG 530
ER + +RM+G
Sbjct: 62 DEKERSMYQRMVG 74
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 33.5 bits (73), Expect = 0.18
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Frame = +3
Query: 9 EPEHDVLSIAEKMEIGIRRRARGNWWYGRDEPQLAVQLYRRALDILDESEGGITDPTPS- 185
EPE+ +K+++ ++A GN YG A+ LY +A++ + + +
Sbjct: 19 EPENSPEEEQDKVKLAEAKKAEGNREYGLKNYVSAIALYSKAIEFAPHVATFYGNRSAAY 78
Query: 186 GELTFANQALKELL------DERLRVHNNMAAAQLKAGAYEAALQAVTRVLSCQPKNAKA 347
++ ++AL++ L + ++ H A L G+ AL+ + +VL PKN A
Sbjct: 79 MMISNYDKALEDALLSIEIDNNFVKGHYRAAKCHLAMGSASNALREIRKVLELDPKNKDA 138
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 234 RLRVHNNMAAAQLKAGAYEAALQAVTRVLSCQPKNAKALYRKSRILSAMGR 386
RLR N+ + + + A + L QP N KALYR++ A+G+
Sbjct: 749 RLRRKNSSSYGSIPPSENDLAEKDANTALGLQPDNVKALYRRALARKALGK 799
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +3
Query: 114 VQLYRRALDILDESEGGITDPTPSGELTFANQALKELLDERLRVHNNMAAAQLKAGAYEA 293
+ L + A D+ ++ G + + +TF QA+ EL + + N + LK Y
Sbjct: 181 LSLEKEAEDLKLKANGYFKEGNYNSAITFYTQAI-ELKADVPAYYGNRSFCYLKTEYYGL 239
Query: 294 ALQAVTRVLSCQPKNAKALYRKSRILSAMGR 386
AL + + K K YR++ A+G+
Sbjct: 240 ALADANKAIQLDRKYIKGYYRRATANMALGK 270
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 246 HNNMAAAQLKAGAYEAALQAVTRVLSCQPKNAKALYRKSRILSAMGR 386
+ N AAA + +E ++ T+ L K KAL R++R L + R
Sbjct: 183 YQNRAAAYEQMNQFENVVEEATKALELNSKYTKALMRRARALEKLER 229
>SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13)
Length = 452
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 267 QLKAGAYEAALQAVTRVLSCQPKNAKALYRKSRILSAMGRNP 392
Q+K + +AA+ + V+S PKN + R++ +LS +GR P
Sbjct: 100 QIKENS-DAAISDFSTVISHSPKNPEGWIRRAEVLSPIGRIP 140
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 216 KELLDERLRVHNNMAAAQLKAGAYEAALQAVTRVLSCQPKNAKALYRKSR 365
K++ L + N AA +LK Y +A++ L +AKAL+R+ +
Sbjct: 33 KKMAAIALPCYLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQ 82
>SB_48843| Best HMM Match : V_ATPase_I (HMM E-Value=0)
Length = 1128
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 456 ELQRCEQRASRDRSVERKLAKRMLGTTDVSAKSDAPSP 569
E++RCE+ + R +++++ K + D S+AP P
Sbjct: 120 EVRRCEEMERKLRFLQKEIEKAEIAMVDTGESSEAPHP 157
>SB_51642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 570
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +3
Query: 90 GRDEPQLAVQLYRRALDILDESEGGITDPTPSGELTFANQALKELLDERLRVHNNMAAAQ 269
G+D P +A QL AL ++ + + L L + NN+A+A
Sbjct: 315 GKDHPDVAKQLNNLALLCQNQGKYDEVEQYYQRALEIYTTKLGPDDPNVAKTKNNLASAY 374
Query: 270 LKAGAYEAALQAVTRVLS 323
LK G Y+AA +VL+
Sbjct: 375 LKQGKYKAAETLYKQVLT 392
>SB_57286| Best HMM Match : zf-C2H2 (HMM E-Value=8.1)
Length = 234
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Frame = +3
Query: 12 PEHDVLSIAEKMEIGIRRRA-----RGNWWYGRDEPQ---------LAVQLYRRALDILD 149
P H++ S+A K+EI + R A G W R + Q AV+ A+ +L
Sbjct: 119 PGHEIFSLANKLEIAMYRLAGIHHFEGAWMLQRQQQQKFLSFHHMDTAVEYLTTAITVLK 178
Query: 150 ESEGGITDPTPSGELTFANQALKELLDERLRVHNNMAAAQLKAGAYE 290
E + + +P + Q + E +++ ++ +A AQ K A E
Sbjct: 179 EVKENVREPLHE---IYNEQVVNEWIND--KIDEKLAYAQDKLKAME 220
>SB_4710| Best HMM Match : Bowman-Birk_leg (HMM E-Value=0.78)
Length = 158
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 213 LKELLDERLRVHNNMAAAQLKAGAYEAALQAVTRVLSCQPK 335
L +L++ RL + + Q++AG Y L T+V+ PK
Sbjct: 37 LNQLMELRLTLKRDKNLLQVEAGVYSCFLGTCTKVIPLMPK 77
>SB_54941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 492 RSVERKLAKRMLGTTDVSAKSDAPSPDKKPSRSK 593
R+ +RK K GT D S K D P D S S+
Sbjct: 7 RAKQRKQDKESTGTRDASLKEDKPRNDTATSMSR 40
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,605,732
Number of Sequences: 59808
Number of extensions: 424347
Number of successful extensions: 1245
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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