Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0260
         (423 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CLH9 Cluster: CAAX prenyl protease; n=3; Cryptosporid...    32   4.2  
UniRef50_UPI00006CB092 Cluster: hypothetical protein TTHERM_0024...    31   9.7  
UniRef50_A5K1S1 Cluster: Putative uncharacterized protein; n=9; ...    31   9.7  
UniRef50_A5DIH4 Cluster: Putative uncharacterized protein; n=1; ...    31   9.7  

>UniRef50_Q5CLH9 Cluster: CAAX prenyl protease; n=3;
           Cryptosporidium|Rep: CAAX prenyl protease -
           Cryptosporidium hominis
          Length = 432

 Score = 32.3 bits (70), Expect = 4.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 415 LYDKYSFNLKTFTVEILN*LHPATLTSLYSIILSDICXYVPNN 287
           L +KY FN  T  + I++ +    L S++  IL  +  Y+ NN
Sbjct: 138 LEEKYGFNNSTLKIFIMDQIKSGLLVSVFGTILISVMIYIANN 180


>UniRef50_UPI00006CB092 Cluster: hypothetical protein
           TTHERM_00241990; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00241990 - Tetrahymena
           thermophila SB210
          Length = 1112

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = -3

Query: 418 KLYDKYSFNLKTFTVEILN*LHPATLTSLYSIILSDICXYVPNNFK*HHRPKWKVIIEYD 239
           +++  YSF    F++ IL+ +  A +  + S         +P   +  H+ KWK+I  + 
Sbjct: 714 QIHQSYSFFTSCFSIIILDLVFAAIM--VISRYFKTSADDMPQALQDQHQTKWKIISYFQ 771

Query: 238 LFHSFHI--FFIKQISL 194
           LF   ++  F ++++SL
Sbjct: 772 LFIPSYVFSFTVQELSL 788


>UniRef50_A5K1S1 Cluster: Putative uncharacterized protein; n=9;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 635

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = -1

Query: 321 YYLIYVXTFLIILSNITGRSGK**LSMIYFILSIFFLLNKYRSIVARIVARPILI 157
           YYLI V  FL+ L+          LS++ F+L + F LN + +I+  +V   IL+
Sbjct: 320 YYLINVVIFLLFLTT---------LSLLVFLLDVLFKLNIFSNIIFHVVILFILL 365


>UniRef50_A5DIH4 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 173

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = -3

Query: 265 KWKVIIEYDLFHSFHIFF-IKQISLYRCEDSSTAHFNLSLTVTRDSSYVR*RSLTIPCLL 89
           K KV   Y  FHSFH FF  K + L++   SSTA++    +    S +VR   L IPC L
Sbjct: 44  KVKVYRNYFSFHSFHSFFNPKLLKLFKL-ISSTANYCEVASCISHSLHVR---LFIPCSL 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,256,369
Number of Sequences: 1657284
Number of extensions: 6136455
Number of successful extensions: 9753
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9752
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)