Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0260
         (423 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   4.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   5.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   5.7  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               20   10.0 

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 93  YLHLINVKLSTIKLITAAFLYETHTDQPV 7
           Y+H   +    +K+I A   + TH  +P+
Sbjct: 553 YIHAQQIAWMALKMIQACSHHLTHKGKPI 581


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 386 NVYCGNLKLVAPGDTNK 336
           N YCGN+ L     +NK
Sbjct: 108 NKYCGNITLNIESTSNK 124


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 277 HHRPKWKVIIEYDL 236
           H R K K+I+EY+L
Sbjct: 52  HERLKKKMILEYEL 65


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 277 HHRPKWKVIIEYDL 236
           H R K K+I+EY+L
Sbjct: 52  HERLKKKMILEYEL 65


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 277 HHRPKWKVIIEYDL 236
           H R K K+I+EY+L
Sbjct: 52  HERLKKKMILEYEL 65


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 277 HHRPKWKVIIEYDL 236
           H R K K+I+EY+L
Sbjct: 52  HERLKKKMILEYEL 65


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 277 HHRPKWKVIIEYDL 236
           H R K K+I+EY+L
Sbjct: 52  HERLKKKMILEYEL 65


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 277 HHRPKWKVIIEYDL 236
           H R K K+I+EY+L
Sbjct: 52  HERLKKKMILEYEL 65


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 277 HHRPKWKVIIEYDL 236
           H R K K+I+EY+L
Sbjct: 52  HERLKKKMILEYEL 65


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 277 HHRPKWKVIIEYDL 236
           H R K K+I+EY+L
Sbjct: 52  HERLKKKMILEYEL 65


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 238 LFHSFHIFFIKQISL 194
           +F ++H FFI  I+L
Sbjct: 1   MFKNYHFFFILVITL 15


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,643
Number of Sequences: 438
Number of extensions: 2292
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)