Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0194
(379 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0479 + 3606663-3607448 126 8e-30
01_06_1461 - 37520885-37520965,37521366-37521461,37522160-37522297 43 7e-05
08_01_0328 + 2959014-2959055,2959336-2959398,2960871-2960949,296... 36 0.014
02_01_0209 - 1399613-1399622,1399719-1399764,1399849-1399927,140... 35 0.018
03_04_0043 + 16747103-16747137,16747237-16747259,16748735-167488... 34 0.043
07_03_1222 - 24983294-24983356,24983695-24983858,24985209-249852... 33 0.075
09_01_0041 + 746494-746691,747301-747495,750509-750631,751457-75... 28 2.1
05_03_0462 - 14316486-14316602,14316689-14316793,14318406-143184... 28 2.1
01_07_0305 - 42631214-42631330,42631423-42631527,42633208-426332... 28 2.1
05_07_0342 + 29402867-29402906,29403012-29403052,29403146-294032... 28 2.8
03_02_0642 + 10086400-10086505,10086675-10087014,10087072-100871... 28 2.8
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367... 27 4.9
07_01_0447 - 3377666-3378673 27 4.9
11_06_0160 - 20794974-20795977,20796241-20796295 27 6.5
08_01_0516 - 4499797-4499949,4500040-4500617,4500699-4500756,450... 26 8.6
06_03_0726 + 23904350-23904964,23905986-23906021,23906158-239062... 26 8.6
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 26 8.6
01_01_1056 + 8346893-8347690,8347841-8347858 26 8.6
>07_01_0479 + 3606663-3607448
Length = 261
Score = 126 bits (303), Expect = 8e-30
Identities = 59/102 (57%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Frame = +3
Query: 69 MTIGKNNKMQQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEFRKI-KSKNSK-T 242
M+ K +KM Q +NYR+RV +QD R + F AFD+HMNL+LGDCEEFRK+ SK+SK T
Sbjct: 1 MSNPKGSKMLQFVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKTT 60
Query: 243 ADREEKRTLGFVLLRGENIVSLTIEGPPPPQEGSASRSLTGS 368
+REE+RTLG +LLRGE +VS+T+EGPPPP E A + G+
Sbjct: 61 GEREERRTLGLLLLRGEEVVSMTVEGPPPPDESRAKAAGAGA 102
>01_06_1461 - 37520885-37520965,37521366-37521461,37522160-37522297
Length = 104
Score = 43.2 bits (97), Expect = 7e-05
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +3
Query: 105 INYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD---REEKRTLGF 275
++ R+ V L+ R A+D+H+N+ILGD EE + +T + R KRT+ F
Sbjct: 27 LDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTIPF 86
Query: 276 VLLRGENIV 302
+ +RG+ ++
Sbjct: 87 LFVRGDGVI 95
>08_01_0328 +
2959014-2959055,2959336-2959398,2960871-2960949,
2961038-2961083,2961566-2961671
Length = 111
Score = 35.5 bits (78), Expect = 0.014
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 93 MQQHINYRVRVILQDSRTFIVTFK--AFDKHMNLILGDCEEFRKIKSKNSKTADREEKRT 266
M Q I R+++ L + + + + FD++MNL+L D EE N K ++ +++
Sbjct: 10 MTQPIKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI------NVK---KDTRKS 60
Query: 267 LGFVLLRGENI 299
LG +LL+G+NI
Sbjct: 61 LGRILLKGDNI 71
>02_01_0209 -
1399613-1399622,1399719-1399764,1399849-1399927,
1400004-1400162,1400988-1401050,1401154-1401222
Length = 141
Score = 35.1 bits (77), Expect = 0.018
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = +3
Query: 126 ILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVS 305
I+ S T V K FD++MNL+L + EE IK ++ +++LG +LL+G+NI
Sbjct: 85 IIVVSVTLHVHAKGFDEYMNLVLDEAEEI-NIK--------KDTRKSLGRILLKGDNITL 135
Query: 306 LTIEG 320
+ G
Sbjct: 136 MMNTG 140
>03_04_0043 +
16747103-16747137,16747237-16747259,16748735-16748856,
16748980-16749042
Length = 80
Score = 33.9 bits (74), Expect = 0.043
Identities = 18/87 (20%), Positives = 45/87 (51%)
Frame = +3
Query: 78 GKNNKMQQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREE 257
G+ ++++++ ++++ L +R + T + FD+ MNL++ N+ + +
Sbjct: 5 GQPPDLKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVV-----------DNTVEVNGND 53
Query: 258 KRTLGFVLLRGENIVSLTIEGPPPPQE 338
K +G V++RG ++V + P P +
Sbjct: 54 KTDIGMVVVRGNSVVMIEALEPVPKSQ 80
>07_03_1222 -
24983294-24983356,24983695-24983858,24985209-24985231,
24985340-24985374
Length = 94
Score = 33.1 bits (72), Expect = 0.075
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 123 VILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIV 302
V L +R I T + FD+ MNL++ N+ + EK +G V++RG ++V
Sbjct: 34 VKLNANRVVIGTLRGFDQFMNLVV-----------DNTVEVNGNEKNDIGMVVIRGNSVV 82
Query: 303 SL-TIEGPPPPQ 335
+ +E P PQ
Sbjct: 83 MIEALEPVPKPQ 94
>09_01_0041 +
746494-746691,747301-747495,750509-750631,751457-751636,
752772-753058,754343-754907
Length = 515
Score = 28.3 bits (60), Expect = 2.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 377 PPIAPGKGTRGGSFLWWRWSFD 312
PP+ R G+ WWRW D
Sbjct: 431 PPVLAATARRRGTAAWWRWHRD 452
>05_03_0462 -
14316486-14316602,14316689-14316793,14318406-14318486,
14318593-14318610
Length = 106
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +3
Query: 108 NYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEF----RKIKSKNSKTADREEKRTLGF 275
N +V + ++++ + +AFD+H N++L + E K K + R +
Sbjct: 31 NTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISK 90
Query: 276 VLLRGENIV 302
+ LRG++++
Sbjct: 91 MFLRGDSVI 99
>01_07_0305 -
42631214-42631330,42631423-42631527,42633208-42633216,
42635198-42636142,42636349-42636450,42637210-42637302
Length = 456
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 114 RVRVILQDSRTFIVTFKAFDKHMNLILGDCEEF----RKIKSKNSKTADREEKRTLGFVL 281
+V + Q+++ + +AFD H N++L + E K K + R + +
Sbjct: 383 KVLINCQNNKKLLGRVRAFDSHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF 442
Query: 282 LRGENIVSLTIEGP 323
LRG++++ + ++ P
Sbjct: 443 LRGDSVI-IVLKNP 455
>05_07_0342 +
29402867-29402906,29403012-29403052,29403146-29403220,
29403523-29403648,29404195-29404247,29404385-29404475
Length = 141
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 93 MQQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEE 209
++ ++ + VI D R + T + FD+ N+IL + E
Sbjct: 8 LESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>03_02_0642 +
10086400-10086505,10086675-10087014,10087072-10087156,
10088679-10088764,10089154-10089331,10089425-10089624,
10089964-10090297
Length = 442
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 204 EEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTIEGPPPP 332
E+ R + K D+E+KRT ++R + L+ + PPPP
Sbjct: 29 EDLRGLTEVKEKVTDKEKKRTSLRTVMRTSAL--LSADQPPPP 69
>08_02_0957 +
23033602-23034749,23035519-23035765,23036598-23036744,
23036849-23037076
Length = 589
Score = 27.1 bits (57), Expect = 4.9
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 60 SDKMTIGKNNKMQQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSK 239
+D+M + + + + I V D+R + D H++ + + EEF KI K +
Sbjct: 463 TDEM-VARLDSLDVEIGNHVSRCKADARLMKDELEKKDHHLSTVEKESEEFLKISEKKLE 521
Query: 240 TADRE 254
A RE
Sbjct: 522 DAKRE 526
>07_01_0447 - 3377666-3378673
Length = 335
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 315 EGPPPPQEGSASRSLTG 365
E PPPP EG AS S G
Sbjct: 214 EAPPPPPEGDASPSAMG 230
>11_06_0160 - 20794974-20795977,20796241-20796295
Length = 352
Score = 26.6 bits (56), Expect = 6.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 213 RKIKSKNSKTADREEKRTLGFVLLRGENIVSLTIEGPPP---PQEGSASRSLT 362
R ++ DR+ RTL + +I L PPP P EG+A+ +LT
Sbjct: 182 RALREGREARQDRKRPRTLSRIKNTRRDIDLLMATPPPPPVRPGEGAAASALT 234
>08_01_0516 -
4499797-4499949,4500040-4500617,4500699-4500756,
4500855-4500932,4501032-4501091,4501219-4501332,
4501436-4501594
Length = 399
Score = 26.2 bits (55), Expect = 8.6
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 258 KRTLGFVLLRGENIVSLTIEG---PPPPQEGSASRSLTGSYG 374
K+TL LL +VS + + PPPP+E S S G G
Sbjct: 286 KQTLADSLLAEAVVVSTSCDASPPPPPPEEEEPSSSAAGDGG 327
>06_03_0726 +
23904350-23904964,23905986-23906021,23906158-23906256,
23906445-23906627,23907016-23907105,23907187-23907285,
23907584-23907688,23907786-23907926,23908009-23908296,
23908536-23908826
Length = 648
Score = 26.2 bits (55), Expect = 8.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 204 EEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTIEGPPPPQEGSASRSLTGSYGR 377
+EF + ++++ D EE V++RGE + P P ++G RS T Y R
Sbjct: 96 DEFFRARAESEDDDDDEE----AVVVVRGEESRG-RLRFPAPAEKGGGRRSSTARYAR 148
>03_03_0246 +
15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 255 EKRTLGFVLLRGENIVSLTIE-GPPPPQEGSASRSLTG 365
EK V+LRGE+ SL PPPP + G
Sbjct: 141 EKAAAAAVVLRGEDFPSLKASVAPPPPPPAQRHKDADG 178
>01_01_1056 + 8346893-8347690,8347841-8347858
Length = 271
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 285 RGENIVSLTIEGPPPPQEGSASRSLTGSYGR 377
RG N + + PPPP S+ L YGR
Sbjct: 35 RGRNTPPASSDVPPPPPPSSSPLELDRLYGR 65
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,772,891
Number of Sequences: 37544
Number of extensions: 147464
Number of successful extensions: 770
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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