Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0194
(379 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12681| Best HMM Match : LSM (HMM E-Value=5.7e-18) 135 1e-32
SB_2028| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 5e-04
SB_18906| Best HMM Match : LSM (HMM E-Value=3.2e-15) 34 0.044
SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19) 31 0.41
SB_26035| Best HMM Match : LSM (HMM E-Value=6.1e-13) 29 0.95
SB_58045| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 29 1.3
SB_25863| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_17159| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_2448| Best HMM Match : E-MAP-115 (HMM E-Value=0.76) 29 1.3
SB_54435| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07) 29 1.7
SB_64| Best HMM Match : Rho_N (HMM E-Value=1.8e-07) 29 1.7
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 2.2
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_18569| Best HMM Match : Rho_N (HMM E-Value=0.0007) 28 2.2
SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2) 27 5.1
SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_49352| Best HMM Match : BDS_I_II (HMM E-Value=2.3) 27 5.1
SB_8961| Best HMM Match : NUDE_C (HMM E-Value=5.6) 27 5.1
SB_17758| Best HMM Match : Transformer (HMM E-Value=0.35) 27 6.7
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_45736| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_38002| Best HMM Match : IncA (HMM E-Value=0.46) 27 6.7
SB_1543| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 26 8.8
SB_18527| Best HMM Match : LSM (HMM E-Value=1.3) 26 8.8
>SB_12681| Best HMM Match : LSM (HMM E-Value=5.7e-18)
Length = 327
Score = 135 bits (326), Expect = 1e-32
Identities = 62/93 (66%), Positives = 75/93 (80%)
Frame = +3
Query: 66 KMTIGKNNKMQQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSKTA 245
K TIGK++KM HINYR+R LQD R FI TF AFDKHMN+ILGDC+EFRKIK K+SK
Sbjct: 23 KPTIGKSSKMLLHINYRMRCTLQDGRVFIGTFLAFDKHMNVILGDCDEFRKIKGKSSKAQ 82
Query: 246 DREEKRTLGFVLLRGENIVSLTIEGPPPPQEGS 344
+REEKR LG VLLRGE++VS+T++GPP + S
Sbjct: 83 EREEKRVLGLVLLRGEHLVSMTVDGPPVADDKS 115
>SB_2028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 40.3 bits (90), Expect = 5e-04
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 81 KNNKMQQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEF 212
+ +++ +N +RV + D RT I +F DK N+ILG C+EF
Sbjct: 29 QRKELESWLNKLMRVKISDGRTLIGSFLCTDKDRNIILGSCQEF 72
>SB_18906| Best HMM Match : LSM (HMM E-Value=3.2e-15)
Length = 443
Score = 33.9 bits (74), Expect = 0.044
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 108 NYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSKTADR----EEKRTLGF 275
N +V + +++R + KAFD+H N++L + +E K+ K + + R +
Sbjct: 29 NTQVLINCRNNRKLLARVKAFDRHCNMVLENVKEMWTETPKSGKGKKKAKPVNKDRYIAK 88
Query: 276 VLLRGENIVSLTIEGP 323
+ LRG++++ L + P
Sbjct: 89 MFLRGDSVI-LVLRNP 103
>SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19)
Length = 431
Score = 30.7 bits (66), Expect = 0.41
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 204 EEFRKIKSKNSKTADREEKRT---LGFVLLRGENIVSLTI--EGPPPPQEGSASRSLTGS 368
E+ IK + + ++E KR L L EN +T+ PPPP +G S +L G
Sbjct: 128 EQEELIKKEQERIKEQERKRAEQQLVRELEERENSAPVTVTPSAPPPPLDGPLSSTLIGD 187
Query: 369 Y 371
Y
Sbjct: 188 Y 188
>SB_26035| Best HMM Match : LSM (HMM E-Value=6.1e-13)
Length = 75
Score = 29.5 bits (63), Expect = 0.95
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 105 INYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEE 209
++ R+ V +++ R A+D+H+N+IL D EE
Sbjct: 24 LDERIYVKMRNDRELRGRLHAYDQHLNMILSDVEE 58
>SB_58045| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1752
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 270 GFVLLRGENIVSLTIEGPPPPQEGSASRSLTGSYGR 377
G + E +SL++ G PPP AS + GSY R
Sbjct: 473 GTTACQRERYLSLSLNGSPPPGRFEASCAEDGSYNR 508
>SB_25863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 45 YLPNHSDKMTIGKNNKMQQHINY--RVRVILQDSR 143
++P H+ M IGK +M + I + RVR I+ SR
Sbjct: 334 FIPEHAMGMVIGKKGRMLEEIKHKTRVRPIIDKSR 368
>SB_17159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 310 QSKDHLHHKKDPPRVPLPGAMGG 378
Q LHH ++PPR P A+GG
Sbjct: 162 QQAQQLHHVEEPPRKAAPPAVGG 184
>SB_2448| Best HMM Match : E-MAP-115 (HMM E-Value=0.76)
Length = 319
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 310 QSKDHLHHKKDPPRVPLPGAMGG 378
Q LHH ++PPR P A+GG
Sbjct: 86 QQAQQLHHVEEPPRKAAPPAVGG 108
>SB_54435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 205 KNSEKLNLKIVKLQTEKKK 261
K KLN+K+ KL+TEKKK
Sbjct: 34 KEVRKLNIKVEKLKTEKKK 52
>SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07)
Length = 1458
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 210 FRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTIEGPPPPQEG-SASRSL 359
F IK+K S+ DR + L +NI + T PP P+ G S S S+
Sbjct: 158 FSWIKNKTSELVDRVKSAGEALADLINQNISAFTNNRPPQPRRGVSISESV 208
>SB_64| Best HMM Match : Rho_N (HMM E-Value=1.8e-07)
Length = 320
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 210 FRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTIEGPPPPQEG-SASRSL 359
F IK+K S+ DR + L +NI + T PP P+ G S S S+
Sbjct: 158 FSWIKNKTSELVDRVKSAGEALADLINQNISAFTNNRPPQPRRGVSISESV 208
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 162 KAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTIEGPPPP 332
KAF+K + G E +K K+ K +E + + R E + +LT PPPP
Sbjct: 503 KAFEKWFKDMAG-LIEMENLKVKDLKALAKERGIPRYYWMRRDELVGALTSTSPPPP 558
>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1998
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 162 KAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTIEGPPPP 332
KAF+K + G E +K K+ K +E + + R E + +LT PPPP
Sbjct: 67 KAFEKWFKDMAG-LIEMENLKVKDLKALAKERGIPRYYWMRRDELVGALTSTSPPPP 122
>SB_18569| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 708
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 162 KAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLRGENIVSLTIEGPPPP 332
KAF+K + G E +K K+ K +E + + R E + +LT PPPP
Sbjct: 51 KAFEKWFKDMAG-LIEMENLKVKDLKALAKERGIPRYYWMRRDELVGALTSTSPPPP 106
>SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2)
Length = 615
Score = 27.1 bits (57), Expect = 5.1
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 196 VIAKNSEKLNLKIVKLQTEKKKELWVLFFYVEKI*FH*QSKDHLHHKKDPPRVPLPGAMG 375
V + KL + KL T K+ L Y ++ Q L H + PPR P A+G
Sbjct: 472 VAREEMNKLKILGKKLNTRNKQYLAARLAYPQQR--GNQQAQQLQHVEKPPREAAPPAVG 529
Query: 376 G 378
G
Sbjct: 530 G 530
>SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 27.1 bits (57), Expect = 5.1
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 358 REREADPSCGGGGPSIVNETIFSPRKRTKPK 266
+++E+DP+ G P+ ++ P +KPK
Sbjct: 410 KDQESDPAPGASSPTTSQSSVSEPTPTSKPK 440
>SB_49352| Best HMM Match : BDS_I_II (HMM E-Value=2.3)
Length = 312
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 213 RKIKSKNSKTADREEKRTLGFVLLRGENIVSLTIEGPP 326
R + + + A+ EKR L +RG NI + T+ G P
Sbjct: 169 RARRKEKERAAEEREKRQLE-AQMRGHNIAAFTMSGSP 205
>SB_8961| Best HMM Match : NUDE_C (HMM E-Value=5.6)
Length = 298
Score = 27.1 bits (57), Expect = 5.1
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 358 REREADPSCGGGGPSIVNETIFSPRKRTKPK 266
+++E+DP+ G P+ ++ P +KPK
Sbjct: 74 KDQESDPAPGASSPTTSQSSVSEPTPTSKPK 104
>SB_17758| Best HMM Match : Transformer (HMM E-Value=0.35)
Length = 974
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 165 AFDKHMNLILGDCEE 209
AFDKHMNL L D +E
Sbjct: 40 AFDKHMNLALMDVDE 54
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 26.6 bits (56), Expect = 6.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 377 PPIAPGKGTRGGSFLWWRW 321
PP APG+G GS LW+ +
Sbjct: 1066 PPRAPGQGQAKGSPLWYEY 1084
>SB_45736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 165 AFDKHMNLILGDCEE 209
AFDKHMNL L D +E
Sbjct: 185 AFDKHMNLALMDVDE 199
>SB_38002| Best HMM Match : IncA (HMM E-Value=0.46)
Length = 197
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 162 KAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLLR 287
K D+ +LIL + ++F +K + + + RE+++ + LR
Sbjct: 139 KISDEEFSLILNEVDKFEALKLQIRQKSGREDEKNVNITKLR 180
>SB_1543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 26.2 bits (55), Expect = 8.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 96 QQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGD-CEEFRK 218
++ + YR+ + +QD R V F + D H I+ D C+ F +
Sbjct: 21 REDVLYRLVLFIQDIRFLYVQFISSDIHKAAIMKDTCKNFER 62
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 299 YIFST*KNKTQSSFFFSVCSFTIFRFNFSEFFAIT 195
Y+ S K+ T+ +F S +FR NF F +T
Sbjct: 1572 YVLSYSKDGTKFRYFHSYNGLKLFRGNFDYFHTVT 1606
>SB_18527| Best HMM Match : LSM (HMM E-Value=1.3)
Length = 198
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 156 TFKAFDKHMNLILGDCEEFRKIKSKNSK 239
T FD++MNL+L + EE +K+K K
Sbjct: 121 TTHGFDEYMNLVLDEAEEVH-LKTKTRK 147
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,039,912
Number of Sequences: 59808
Number of extensions: 164931
Number of successful extensions: 736
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 632178915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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