Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0194
         (379 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical pr...   135   9e-33
Z69385-6|CAA93428.1|  104|Caenorhabditis elegans Hypothetical pr...    38   0.002
AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical ...    38   0.003
AC084197-12|AAL00875.1|   98|Caenorhabditis elegans Lsm sm-like ...    35   0.017
Z69302-4|CAA93263.1|  125|Caenorhabditis elegans Hypothetical pr...    34   0.029
Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical pr...    33   0.068
U42436-7|AAO61428.2|  223|Caenorhabditis elegans Hypothetical pr...    28   2.5  

>Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical
           protein W08E3.1 protein.
          Length = 160

 Score =  135 bits (327), Expect = 9e-33
 Identities = 61/102 (59%), Positives = 76/102 (74%)
 Frame = +3

Query: 69  MTIGKNNKMQQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD 248
           MTI KNNKM  H+NYR+++ILQD RTFI  FKAFDKHMN++L +CEE R+IK K  K  D
Sbjct: 1   MTISKNNKMMAHLNYRMKIILQDGRTFIGFFKAFDKHMNILLAECEEHRQIKPKAGKKTD 60

Query: 249 REEKRTLGFVLLRGENIVSLTIEGPPPPQEGSASRSLTGSYG 374
            EEKR LG VL+RGE+IVS+T++GPPP  + S   +  G  G
Sbjct: 61  GEEKRILGLVLVRGEHIVSMTVDGPPPRDDDSVRLAKAGGAG 102


>Z69385-6|CAA93428.1|  104|Caenorhabditis elegans Hypothetical
           protein ZK593.7 protein.
          Length = 104

 Score = 38.3 bits (85), Expect = 0.002
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = +3

Query: 93  MQQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLG 272
           + + ++  +RV  Q  R      + FD+ +N++L DC E+ +     S   D  E R LG
Sbjct: 16  LTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVVGD--ETRQLG 73

Query: 273 FVLLRGENI 299
            ++ RG  I
Sbjct: 74  LIVARGTAI 82


>AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical
           protein Y62E10A.12 protein.
          Length = 102

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
 Frame = +3

Query: 105 INYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEE---FRKIKSKNSKTADREEKRTLGF 275
           ++ RV V +++ R      +AFD+H+N++L + EE    R++     +   ++ KR +  
Sbjct: 25  LDERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETITTREVDEDTFEEIYKQTKRVVPM 84

Query: 276 VLLRGENIV 302
           + +RG++++
Sbjct: 85  LFVRGDSVI 93


>AC084197-12|AAL00875.1|   98|Caenorhabditis elegans Lsm sm-like
           protein protein 8 protein.
          Length = 98

 Score = 35.1 bits (77), Expect = 0.017
 Identities = 19/69 (27%), Positives = 34/69 (49%)
 Frame = +3

Query: 93  MQQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLG 272
           +  ++N  V V+  D R  +   K FD+ +NL++ D  E    +++   T        LG
Sbjct: 5   LDAYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTT------PLG 58

Query: 273 FVLLRGENI 299
             ++RGEN+
Sbjct: 59  LYIIRGENV 67


>Z69302-4|CAA93263.1|  125|Caenorhabditis elegans Hypothetical
           protein F40F8.9 protein.
          Length = 125

 Score = 34.3 bits (75), Expect = 0.029
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = +3

Query: 99  QHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFV 278
           + ++ ++ V+L+D R  I   ++ D+  NLIL D  E   ++    +T         GF+
Sbjct: 16  EQLDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETGQ-------GFM 68

Query: 279 LLRGENI 299
           L+RGEN+
Sbjct: 69  LIRGENV 75


>Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical
           protein C52E4.3 protein.
          Length = 118

 Score = 33.1 bits (72), Expect = 0.068
 Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = +3

Query: 108 NYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEEF----RKIKSKNSKTADREEKRTLGF 275
           N++V +  ++++  +   KAFD+H N++L + +E      K      K     + R +  
Sbjct: 39  NHQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISK 98

Query: 276 VLLRGENIVSLTIEGP 323
           + LRG++++ L ++ P
Sbjct: 99  MFLRGDSVI-LVVKNP 113


>U42436-7|AAO61428.2|  223|Caenorhabditis elegans Hypothetical
           protein C49H3.4 protein.
          Length = 223

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 96  QQHINYRVRVILQDSRTFIVTFKAFDKHMNLILGDCEE 209
           Q+ I  RVR  ++  R F      FD+H NL++ D  E
Sbjct: 120 QKRIEVRVRSAIRIDRIFEGIPTTFDEHFNLMMKDVTE 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,708,345
Number of Sequences: 27780
Number of extensions: 134632
Number of successful extensions: 494
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)