Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0194
         (379 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   1.6  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   1.6  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   3.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.4  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 202 AKNSEKLNLKIVKLQTEKKKELWVL 276
           ++  +K+  K+V+   + K E+WVL
Sbjct: 79  SEKQKKIADKVVQFLIDNKPEIWVL 103


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 202 AKNSEKLNLKIVKLQTEKKKELWVL 276
           ++  +K+  K+V+   + K E+WVL
Sbjct: 79  SEKQKKIADKVVQFLIDNKPEIWVL 103


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 255 EKRTLGFVLLRGENIVSLTIEGPPPPQEGSASRSL 359
           EK TLG   L    +  +TI    PP E +   SL
Sbjct: 243 EKVTLGISALLSMTVFLMTIRESLPPTEKTPLISL 277


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 355 EREADPSCGGGGPSIV 308
           E +  PSC GGGP+I+
Sbjct: 363 ELQEAPSC-GGGPTIL 377


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 321  PPPPQEGSA 347
            PPPP+ GSA
Sbjct: 1702 PPPPRMGSA 1710


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,460
Number of Sequences: 438
Number of extensions: 1809
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)