Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0190
(780 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 143 2e-34
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 140 1e-33
02_04_0312 - 21942310-21943356 31 1.0
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 29 4.1
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 29 4.1
01_06_0489 + 29754298-29754549,29754639-29754772,29755667-297557... 29 4.1
11_04_0037 - 12642141-12642239,12643352-12643618,12643682-126437... 29 5.5
06_03_1004 - 26832638-26833183,26833373-26833569,26833636-268338... 29 5.5
11_02_0053 - 7797580-7798731 28 7.2
07_03_0333 - 16888606-16888740,16889463-16889570,16889691-168897... 28 7.2
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 28 7.2
06_01_0313 - 2250312-2250516,2250585-2250610,2250792-2251076,225... 28 7.2
03_03_0248 + 15819264-15819460,15820691-15820729,15820797-158209... 28 7.2
01_01_1164 + 9263990-9264409,9264498-9264603,9264825-9264877,926... 28 7.2
11_06_0564 - 25022353-25022546,25022654-25022894,25022936-250230... 28 9.6
06_03_0501 + 21476715-21476785,21477045-21477786,21478097-214782... 28 9.6
01_06_0925 - 33067106-33067280,33069193-33069517,33070757-330707... 28 9.6
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 143 bits (346), Expect = 2e-34
Identities = 67/126 (53%), Positives = 96/126 (76%), Gaps = 1/126 (0%)
Frame = +1
Query: 40 VQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSR 219
VQLVGK +LAE+DKITLE AKLL++D+L QN+++ YD+FCPFYK+V M++NII F ++
Sbjct: 513 VQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFNTLAN 572
Query: 220 HAVESTAQSD-NKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLEDMSAA 396
AVE A +D K+T++VI+ MG++ Y+L S KF+DP +GE + A F +L +D++
Sbjct: 573 QAVERAANADGQKITYSVIKHRMGDLFYRLVSQKFEDPA-EGEDVLVAKFQKLYDDLTTG 631
Query: 397 FRNLED 414
FRNLED
Sbjct: 632 FRNLED 637
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 140 bits (339), Expect = 1e-33
Identities = 66/126 (52%), Positives = 97/126 (76%), Gaps = 1/126 (0%)
Frame = +1
Query: 40 VQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSR 219
VQLVGK +LAE+DKITLE AKLL++D+L QN+++ YD++CPFYK+V M++NII F ++
Sbjct: 502 VQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVWMMRNIIHFNTLAT 561
Query: 220 HAVESTAQSD-NKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLEDMSAA 396
AVE A +D K+T++VI+ MG++ Y+L S KF+DP +G+ + A F +L +D++A
Sbjct: 562 QAVERAAGADGQKITYSVIKHRMGDLFYRLVSQKFEDPA-EGKEVLIAKFQKLYDDLTAG 620
Query: 397 FRNLED 414
FRNLED
Sbjct: 621 FRNLED 626
>02_04_0312 - 21942310-21943356
Length = 348
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +3
Query: 39 RAAGRQGVPRGN*QDHARGRQAAQR---RLPATEQLFVVRS 152
RAAGRQ +PR N H RG +R RLP +L ++ S
Sbjct: 230 RAAGRQALPRSNSTGHERGGGGMERFALRLPEHVRLEILMS 270
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +3
Query: 24 GPVRNRAAGRQGVPRGN*QDHARGRQAAQRRLPATEQLFVVRSLLPVLQDGGHAEEHHHV 203
G R AAG + VPRG ++ RGRQ R A S P A +
Sbjct: 677 GVFREEAAGDRAVPRGRVRE-GRGRQRRHRGFIALWASTAAPSPAPSAVGPTPAAAAAEL 735
Query: 204 LRHVAARG 227
LR VAA G
Sbjct: 736 LRRVAAPG 743
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +2
Query: 5 RSCRRKRTCPKSCSWSARRP---SRKLTRSRSRSPSCSKTTS 121
R+ RR+R+ SCS S RR SR +RSRSRS S S++ S
Sbjct: 144 RNLRRERSY--SCSPSPRRGRGRSRSYSRSRSRSRSYSRSRS 183
>01_06_0489 +
29754298-29754549,29754639-29754772,29755667-29755721,
29755888-29756007,29756048-29756140,29756360-29756474,
29756728-29757077,29757264-29757332,29757902-29758509,
29758577-29758646
Length = 621
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -1
Query: 282 GVADDVPRDLVVGLRRGLHRVPRHVVERDDVLQHAHRLVERAEAIVR 142
G+ D+ R+LVVGL + ++ V ++D+LQ RL A +I R
Sbjct: 463 GLISDI-RNLVVGLSSRRGQRAKNKVLQEDILQEIERLAAEAYSIFR 508
>11_04_0037 -
12642141-12642239,12643352-12643618,12643682-12643750,
12643919-12644116,12644262-12644267
Length = 212
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 171 DGGHAEEHHHVLRHVAARGGVHGAVRQQGHVER 269
D + H V+ +A GG HGA R+QG R
Sbjct: 108 DEKQRQRQHKVVVGLAVAGGEHGAARKQGKQSR 140
>06_03_1004 -
26832638-26833183,26833373-26833569,26833636-26833861,
26833943-26834072,26835884-26836188
Length = 467
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 9 PAGGRGPVRNRAAGRQGVPRG 71
P GGR P R R G G PRG
Sbjct: 62 PGGGRPPARGREGGGGGNPRG 82
>11_02_0053 - 7797580-7798731
Length = 383
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 312 GGELVEHVA--HGVADDVPRDLVVGLRRGLHRVPRHV 208
GG VEHV G+ DDV D + + G HR R V
Sbjct: 14 GGVAVEHVELIPGMPDDVAVDCLARVPHGAHRAMRRV 50
>07_03_0333 -
16888606-16888740,16889463-16889570,16889691-16889790,
16890473-16890560,16890637-16893253
Length = 1015
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 96 RQAAQRRLPATEQLFVVRSLLPVLQDGGHAEEHHHVLRHVAARG 227
R A + P T Q + +L L GHA + +LRH+ ARG
Sbjct: 140 RMAREGAPPPTNQAYA--ALADALAKAGHARDSLLLLRHMRARG 181
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2
Query: 2 RRSCRRKRTCPKSCSWSARRPSRKLTRSRSRSP 100
R RR R P++ S S R P R +RSRSRSP
Sbjct: 453 RSPVRRYRGSPRASSPS-RYPRRDRSRSRSRSP 484
>06_01_0313 -
2250312-2250516,2250585-2250610,2250792-2251076,
2251289-2251567,2251817-2252121,2252581-2252860,
2253209-2253475
Length = 548
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 190 NIITFYDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVK 336
N++ + SRH + A S +K++ N + A+ V KF++ K
Sbjct: 41 NMVVILNDSRHTLLPKADSQSKMSINALSSALSKVQSSKGFRKFREAAK 89
>03_03_0248 +
15819264-15819460,15820691-15820729,15820797-15820936,
15821150-15821225,15822866-15823160,15823236-15823342,
15823442-15823489,15823568-15823853,15823954-15823961,
15824083-15824184,15824426-15824553,15824664-15824741,
15825047-15825145,15825247-15825302
Length = 552
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2
Query: 14 RRKRTCPKSCSWSARRPSRKLTRSRSRSPSCSK 112
R +R P S+S R SR +RSRSRSPS S+
Sbjct: 285 REQRRSPSYDSYSRGRRSR--SRSRSRSPSYSR 315
>01_01_1164 +
9263990-9264409,9264498-9264603,9264825-9264877,
9265249-9265380,9266250-9266372
Length = 277
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 5 RSCRRKRTCPKSCSWSARRPSRKLTRSRSRS 97
RSCRR+R P + + RP+R +R+R+R+
Sbjct: 50 RSCRRRRV-PAPAAAAETRPTRSPSRARARA 79
>11_06_0564 -
25022353-25022546,25022654-25022894,25022936-25023041,
25023341-25023565,25023704-25023793,25025001-25025120,
25025210-25025356,25026282-25026490
Length = 443
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 3 GDPAGGRGPVRNRAAGRQGVP 65
GD GG GP AGR GVP
Sbjct: 5 GDGGGGGGPATGGRAGRGGVP 25
>06_03_0501 +
21476715-21476785,21477045-21477786,21478097-21478246,
21478350-21478589,21479968-21480048,21480144-21480185,
21480953-21481033,21481271-21481368,21482574-21482667,
21482733-21482861,21483881-21483931,21484023-21484049,
21484280-21484387,21484956-21485201
Length = 719
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +3
Query: 147 RSLLPVLQDGGHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHGQRALPALLHEV 320
R + ++ HA H H HV G HG H H HG P+ H V
Sbjct: 215 RDAMHIVGIHAHAAAHRHSHAHV--HGACHGGAVNDAHA--HGHGHGHEEGPSARHVV 268
>01_06_0925 -
33067106-33067280,33069193-33069517,33070757-33070795,
33071188-33071395
Length = 248
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 8 SCRRKRTCPKSCSWSARRPSRKLTRSRSRSPSCSKTTSC 124
+C T +C R SRK+ R SRS SC+ C
Sbjct: 183 TCADLTTDRVTCGDEEERASRKVLRGCSRSTSCTGCVKC 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,877,205
Number of Sequences: 37544
Number of extensions: 388405
Number of successful extensions: 1364
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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