Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0190
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L09234-1|AAA35578.1| 615|Homo sapiens ATPase protein. 239 8e-63
L09235-1|AAA83249.1| 617|Homo sapiens ATPase protein. 217 3e-56
BT006672-1|AAP35318.1| 617|Homo sapiens ATPase, H+ transporting... 217 3e-56
BC013138-1|AAH13138.1| 617|Homo sapiens ATPase, H+ transporting... 217 3e-56
AF113129-1|AAF14870.1| 617|Homo sapiens vacuolar ATPase isoform... 217 3e-56
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 34 0.66
>L09234-1|AAA35578.1| 615|Homo sapiens ATPase protein.
Length = 615
Score = 239 bits (585), Expect = 8e-63
Identities = 112/125 (89%), Positives = 119/125 (95%)
Frame = +1
Query: 40 VQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSR 219
VQLVGKASLAETDKITLEVAKLLKDDFLQQNSYS YDRFCPFYKTVGMLKN+I FYDMSR
Sbjct: 491 VQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSPYDRFCPFYKTVGMLKNMIAFYDMSR 550
Query: 220 HAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLEDMSAAF 399
HAVESTAQS+NK+TWNVIRD+MGN+LYQLSSMKFKDPVKDGE KIKADF+QL ED+ AF
Sbjct: 551 HAVESTAQSENKITWNVIRDSMGNILYQLSSMKFKDPVKDGEAKIKADFEQLHEDIQQAF 610
Query: 400 RNLED 414
RNLED
Sbjct: 611 RNLED 615
>L09235-1|AAA83249.1| 617|Homo sapiens ATPase protein.
Length = 617
Score = 217 bits (531), Expect = 3e-56
Identities = 99/125 (79%), Positives = 115/125 (92%)
Frame = +1
Query: 40 VQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSR 219
VQLVGKASLAETDKITLEVAKL+KDDFLQQN Y+ YDRFCPFYKTVGML N+I FYDM+R
Sbjct: 493 VQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMAR 552
Query: 220 HAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLEDMSAAF 399
AVE+TAQSDNK+TW++IR+ MG++LY+LSSMKFKDP+KDGE KIK+D+ QLLEDM AF
Sbjct: 553 RAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSDYAQLLEDMQNAF 612
Query: 400 RNLED 414
R+LED
Sbjct: 613 RSLED 617
>BT006672-1|AAP35318.1| 617|Homo sapiens ATPase, H+ transporting,
lysosomal 70kDa, V1 subunit A, isoform 1 protein.
Length = 617
Score = 217 bits (531), Expect = 3e-56
Identities = 99/125 (79%), Positives = 115/125 (92%)
Frame = +1
Query: 40 VQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSR 219
VQLVGKASLAETDKITLEVAKL+KDDFLQQN Y+ YDRFCPFYKTVGML N+I FYDM+R
Sbjct: 493 VQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMAR 552
Query: 220 HAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLEDMSAAF 399
AVE+TAQSDNK+TW++IR+ MG++LY+LSSMKFKDP+KDGE KIK+D+ QLLEDM AF
Sbjct: 553 RAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSDYAQLLEDMQNAF 612
Query: 400 RNLED 414
R+LED
Sbjct: 613 RSLED 617
>BC013138-1|AAH13138.1| 617|Homo sapiens ATPase, H+ transporting,
lysosomal 70kDa, V1 subunit A protein.
Length = 617
Score = 217 bits (531), Expect = 3e-56
Identities = 99/125 (79%), Positives = 115/125 (92%)
Frame = +1
Query: 40 VQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSR 219
VQLVGKASLAETDKITLEVAKL+KDDFLQQN Y+ YDRFCPFYKTVGML N+I FYDM+R
Sbjct: 493 VQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMAR 552
Query: 220 HAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLEDMSAAF 399
AVE+TAQSDNK+TW++IR+ MG++LY+LSSMKFKDP+KDGE KIK+D+ QLLEDM AF
Sbjct: 553 RAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSDYAQLLEDMQNAF 612
Query: 400 RNLED 414
R+LED
Sbjct: 613 RSLED 617
>AF113129-1|AAF14870.1| 617|Homo sapiens vacuolar ATPase isoform
VA68 protein.
Length = 617
Score = 217 bits (531), Expect = 3e-56
Identities = 99/125 (79%), Positives = 115/125 (92%)
Frame = +1
Query: 40 VQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSR 219
VQLVGKASLAETDKITLEVAKL+KDDFLQQN Y+ YDRFCPFYKTVGML N+I FYDM+R
Sbjct: 493 VQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMAR 552
Query: 220 HAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLEDMSAAF 399
AVE+TAQSDNK+TW++IR+ MG++LY+LSSMKFKDP+KDGE KIK+D+ QLLEDM AF
Sbjct: 553 RAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSDYAQLLEDMQNAF 612
Query: 400 RNLED 414
R+LED
Sbjct: 613 RSLED 617
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 33.9 bits (74), Expect = 0.66
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2
Query: 5 RSCRRKRTCPKSCSWSARRPSRKLTRSRSRSPSCS 109
RSC R +C +S S S R SR +RS+SRS S S
Sbjct: 770 RSCSRSSSCSRSRSRSRSRSSRSRSRSQSRSRSKS 804
Score = 30.7 bits (66), Expect = 6.1
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 5 RSCRRKRTCPKSCSWSARRPSRKL-TRSRSRSPSCSKTTSCN 127
RS R ++ +S S S R S+ + SRSRS SCS+++SC+
Sbjct: 738 RSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSSSCS 779
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,992,105
Number of Sequences: 237096
Number of extensions: 1984292
Number of successful extensions: 6344
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6286
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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