Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0187
(780 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 42 5e-04
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 38 0.006
At4g29060.1 68417.m04157 elongation factor Ts family protein sim... 37 0.017
At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /... 36 0.023
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 36 0.040
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 35 0.053
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 35 0.070
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 34 0.12
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 33 0.16
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 33 0.16
At2g02790.1 68415.m00222 calmodulin-binding family protein very ... 33 0.28
At3g49990.1 68416.m05466 expressed protein 32 0.37
At5g26200.1 68418.m03118 mitochondrial substrate carrier family ... 32 0.49
At1g34590.1 68414.m04299 hypothetical protein 31 0.86
At5g63550.1 68418.m07976 expressed protein 31 1.1
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 30 1.5
At1g12080.2 68414.m01397 expressed protein 30 1.5
At5g03380.1 68418.m00291 heavy-metal-associated domain-containin... 29 2.6
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 29 2.6
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 29 2.6
At2g37390.1 68415.m04585 heavy-metal-associated domain-containin... 29 2.6
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 29 2.6
At1g04810.1 68414.m00477 26S proteasome regulatory subunit, puta... 29 3.5
At4g11860.1 68417.m01887 expressed protein contains Pfam domain ... 29 4.6
At3g43530.1 68416.m04621 hypothetical protein contains Pfam prof... 29 4.6
At3g01700.1 68416.m00103 arabinogalactan-protein (AGP11) identic... 29 4.6
At2g45800.1 68415.m05696 LIM domain-containing protein similar t... 29 4.6
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 4.6
At1g20530.1 68414.m02558 hypothetical protein 29 4.6
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 29 4.6
At4g26630.1 68417.m03837 expressed protein 28 6.0
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 28 6.0
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 28 6.0
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 28 6.0
At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) l... 28 6.0
At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) l... 28 6.0
At1g12080.1 68414.m01396 expressed protein 28 6.0
At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containi... 28 6.0
At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family... 28 8.0
At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putati... 28 8.0
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to... 28 8.0
At2g02170.1 68415.m00153 remorin family protein contains Pfam do... 28 8.0
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/117 (23%), Positives = 58/117 (49%)
Frame = +1
Query: 421 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 600
P A AK+ +K ++ ++ +DS +E + +K KP+A D+ S D + + +
Sbjct: 141 PAAAAKNGSVKAKKESSSEDDSSSEDEPAKKPAAKIAKPAAKDSSSSDDDS----DEDSE 196
Query: 601 IDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSA 771
+ T ++ AA + +++D +D +++KPA D ++ S+D+S+
Sbjct: 197 DEKPATKKAAPAAAKAASSSDSSDED--SDEESEDEKPAQKKADTKASKKSSSDESS 251
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Frame = +1
Query: 424 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA-------TDAEGSADSAAII 582
+ E + +K EE A E +K E++ + ++ EEK S T GSA + I
Sbjct: 260 ELETEVEVVKAEETAEATEQAKVELEGKLEDVIVEEKDSEINSKDEKTSESGSALCSEEI 319
Query: 583 PNMVKKIDLAPTVESDAAAIPEIKTPEAA--DAPKLADNPVDEDKPADIS 726
+ +++ + P E++ A I E A + + D P +E+KP++ S
Sbjct: 320 LSTIQESNTDPIKETEGDASYPIDVIEKAITEEKHVVDEPANEEKPSESS 369
Score = 27.9 bits (59), Expect = 8.0
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 436 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 615
K + V PA E + T+ + V E K+E+ + ++A+ A +KK P
Sbjct: 506 KETEGDVPSPADVIEKAITDEKHVVEEPLKDEQENVSEAKDVVTKLAAEDENIKKDTDTP 565
Query: 616 TVESDA-AAIPEIKTP--EAADAPKLADNPVDEDKPADISPDAPKAE 747
E + + E T E A + P+ E K A++ AP A+
Sbjct: 566 VAEGKSEETLKETDTESVEKEAAANKQEEPITE-KVAEVVETAPVAK 611
>At4g29060.1 68417.m04157 elongation factor Ts family protein
similar to SP|P35019 Elongation factor Ts (EF-Ts)
{Galdieria sulphuraria}; contains Pfam profiles PF00627:
UBA/TS-N domain, PF00889: Elongation factor TS, PF00575:
S1 RNA binding domain
Length = 953
Score = 36.7 bits (81), Expect = 0.017
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Frame = +1
Query: 421 PDAEAKSADIKVEEPAAQPED--------SKT------EVQATVAEISKEEKPSATDA-E 555
P+AEA +VEE P + S+T EV AT AE EK T+
Sbjct: 373 PEAEASVTSAEVEESVCVPAEVTSEEVPSSETPKVVEEEVIATKAEDDSPEKEEQTETLA 432
Query: 556 GSADSAAIIPNMVKKIDLAPTVESDA---AAIPEIKTPEAADAPKLADNPVDEDKPAD-I 723
+A++ ++P + + VE+ +A E+ +PEA + ++ V + P D +
Sbjct: 433 AAAEAEEVVPPIPETKSEEEIVENSIPPNSATDEVSSPEALASEEVEKEQVVAETPVDEV 492
Query: 724 SPDAPKAEAKSADDSATTA 780
AP S+++S TA
Sbjct: 493 KTPAPVVTEASSEESGNTA 511
>At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to SEC14-like protein 2
(Alpha-tocopherol associated protein) (TAP) (bTAP)
(Fragment) (SP:P58875) {Bos taurus}
Length = 683
Score = 36.3 bits (80), Expect = 0.023
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Frame = +1
Query: 421 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA-----TDAEGSADSAAIIP 585
P E K + K EE + E+ KTE ++ AE +EEK +A T E + A I
Sbjct: 123 PVKEEKVEEKKTEETEEKKEEVKTEEKSLEAETKEEEKSAAPATVETKKEEILAAPAPIV 182
Query: 586 NMVKKID--LAPT-VESDAAA--IPEIKTPEAAD-APKLADNPVDED-KPADISPDAP-K 741
KK + +AP VE+ AA + E K E AP + V+E P + +P AP
Sbjct: 183 AETKKEETPVAPAPVETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVT 242
Query: 742 AEAKSADDSA 771
E K + +A
Sbjct: 243 TETKEEEKAA 252
Score = 34.7 bits (76), Expect = 0.070
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 10/128 (7%)
Frame = +1
Query: 406 KSSEIPDAEAK-SADIKVEEPAAQP---EDSKTEVQAT----VAEISKEEKPSATDAEGS 561
K E+ E A+ K EE +A P E K E+ A VAE KEE P A +
Sbjct: 140 KKEEVKTEEKSLEAETKEEEKSAAPATVETKKEEILAAPAPIVAETKKEETPVAPAPVET 199
Query: 562 ADSAAIIPNMVKKIDLAPT--VESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDA 735
+A ++ KK ++ P V ++ ++ E A + +E+K A ++ +
Sbjct: 200 KPAAPVVAE-TKKEEILPAAPVTTETKVEEKVVPVETTPAAPVTTETKEEEKAAPVTTET 258
Query: 736 PKAEAKSA 759
K E K+A
Sbjct: 259 -KEEEKAA 265
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 35.5 bits (78), Expect = 0.040
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Frame = +1
Query: 436 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPS-ATDAEGSADSAAIIPNMVKKIDLA 612
K K E+P +PE K E A ++ KP + + S+ P K +
Sbjct: 469 KQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPP 528
Query: 613 PTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADI-SPDAPKAEAKSADDS 768
ES P+ +TP+ ++PK + KP + P PK E ++S
Sbjct: 529 KPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEES 581
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 35.1 bits (77), Expect = 0.053
Identities = 43/155 (27%), Positives = 61/155 (39%), Gaps = 2/155 (1%)
Frame = +1
Query: 292 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEA-KSADIKVEEPA 468
E+P PE K ++ P+ +I K EIP E K +I +
Sbjct: 110 ELPKFPEIPKPEL-PKMPEIPKPELPKVPEIQKPELP-KMPEIPKPELPKFPEIPKPDLP 167
Query: 469 AQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM-VKKIDLAPTVESDAAAIP 645
PE+SK EV + E K E P + IP + K+ P +E A +P
Sbjct: 168 KFPENSKPEVPKLM-ETEKPEAPKVPE----------IPKPELPKLPEVPKLE--APKVP 214
Query: 646 EIKTPEAADAPKLADNPVDEDKPADISPDAPKAEA 750
EI+ PE P+L P + P+ PK EA
Sbjct: 215 EIQKPELPKMPELPKMPEIQKPELPKLPEVPKLEA 249
Score = 33.1 bits (72), Expect = 0.21
Identities = 39/135 (28%), Positives = 53/135 (39%)
Frame = +1
Query: 292 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 471
E+P +PE K + AP+ +I K E+P K +I+ E
Sbjct: 237 ELPKLPEVPKLE-APKVPEIQKPELPKMPELPKMPEIQKP-ELP----KMPEIQKPELPK 290
Query: 472 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEI 651
PE K E+ TV E+ K E P + IP V K +L E A+PEI
Sbjct: 291 VPEVPKPELP-TVPEVPKSEAPKFPEIP--KPELPKIPE-VPKPELPKVPEITKPAVPEI 346
Query: 652 KTPEAADAPKLADNP 696
PE P+L P
Sbjct: 347 PKPELPTMPQLPKLP 361
Score = 29.5 bits (63), Expect = 2.6
Identities = 32/112 (28%), Positives = 45/112 (40%)
Frame = +1
Query: 412 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 591
+E P+A K +I E PE K E V EI K E P + + I
Sbjct: 183 TEKPEAP-KVPEIPKPELPKLPEVPKLEAPK-VPEIQKPELPKMPELPKMPE---IQKPE 237
Query: 592 VKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAE 747
+ K+ P +E A +PEI+ PE P+L P + P+ K E
Sbjct: 238 LPKLPEVPKLE--APKVPEIQKPELPKMPELPKMPEIQKPELPKMPEIQKPE 287
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 34.7 bits (76), Expect = 0.070
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +1
Query: 430 EAKSADIKVEE--PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 603
E + ++KVEE PA + + +A E EEKP AE + + A+
Sbjct: 145 EETTTEVKVEEEKPAVPAAEEEKSSEAAPVETKSEEKPE-EKAEVTTEKASSAEE----- 198
Query: 604 DLAPTVESDAAAIPEIKTPEAADAPKLADN-PVDEDKPAD 720
D TVE+ +I + PE+A AP + + V E +P +
Sbjct: 199 DGTKTVEAIEESIVSVSPPESAVAPVVVETVAVAEAEPVE 238
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats, Pfam:PF00560;
contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 33.9 bits (74), Expect = 0.12
Identities = 27/120 (22%), Positives = 48/120 (40%)
Frame = +1
Query: 409 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 588
SSE S+ + P P + T VQA + P+ + + S A P
Sbjct: 696 SSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQA--PT 753
Query: 589 MVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDS 768
+ + APT S P + E +P+ ++ V+ +P ++P + + + S D S
Sbjct: 754 PILEPVHAPTPNSKPVQSP-TPSSEPVSSPEQSEE-VEAPEPTPVNPSSVPSSSPSTDTS 811
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 415 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 594
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEEKK 187
Query: 595 KKIDLAPTVESDAAAIPE--IKTPEAADAPKLADNP 696
+++ + A A+ E +K PE +A+ P
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKEPETTTTAPVAEPP 223
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 415 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 594
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEEKK 187
Query: 595 KKIDLAPTVESDAAAIPE--IKTPEAADAPKLADNP 696
+++ + A A+ E +K PE +A+ P
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKEPETTTTAPVAEPP 223
>At2g02790.1 68415.m00222 calmodulin-binding family protein very low
similarity to SP|P12036 Neurofilament triplet H protein
{Homo sapiens}; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 636
Score = 32.7 bits (71), Expect = 0.28
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 9/132 (6%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQ----PEDSKTE-VQATVA---EISKEEKPSATDAEGS 561
K EI DA K ++ +EE + PED K + T++ ++ K+EK D +
Sbjct: 375 KKKEIADAVQK--ELPIEEVSVSLVDAPEDEKMNLIPVTISKESDLDKDEKSLVLD-KPE 431
Query: 562 ADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAP- 738
D K + T E D +A +I+ P+A + + + + KP+D P
Sbjct: 432 QDELRTAERDDKAEEELKTAERDDSAEEKIQEPDAQISSENGNVASENTKPSDRRASLPA 491
Query: 739 KAEAKSADDSAT 774
K E DD T
Sbjct: 492 KIENHHQDDGLT 503
>At3g49990.1 68416.m05466 expressed protein
Length = 502
Score = 32.3 bits (70), Expect = 0.37
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +1
Query: 418 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVK 597
+P A+ D+K E P A+P KT Q + E K+E+ +A AE A II K
Sbjct: 422 LPGRRAEQTDVKAEIPKAEPIKRKTHGQESKEE--KKERKNAVKAE--KREARIIKKQTK 477
Query: 598 KIDLAPTVESDAA 636
+ T + A
Sbjct: 478 MLYCGETQRAQRA 490
>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -2
Query: 227 LTESSILGATSRIG*AGTTSFSSATGIAKLTAAKA 123
+T+SS+ AT R+G + TTS + A G A LT+A A
Sbjct: 112 ITKSSVGQATVRLGLSDTTSLAVANGAAGLTSAVA 146
>At1g34590.1 68414.m04299 hypothetical protein
Length = 820
Score = 31.1 bits (67), Expect = 0.86
Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 1/118 (0%)
Frame = +1
Query: 418 IPDAEAKSADIKVEEPAAQPEDSKT-EVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 594
IPDA A D + P A PE S+ V A S DA ++ +IP+
Sbjct: 436 IPDAAAP-VDAGLISPRAAPEASRDGNVIPDAAAPVDAGLISLRDAPEASRDGNVIPDAA 494
Query: 595 KKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDS 768
+D AP+ +A P + EA A ++D + D K K S
Sbjct: 495 APVDAAPSEAQEAE--PSVAASEAVVALPVSDTAAGKRVRVDDESSKKKKTKKKTSGS 550
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 415 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 594
E D + + +++VE+P+ + SK V+ + K+++PS A+GSA S +
Sbjct: 320 EKTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPS---AKGSARSGEKSSKQI 376
Query: 595 KKIDLAP 615
K +P
Sbjct: 377 AKSTSSP 383
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 30.3 bits (65), Expect = 1.5
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Frame = +1
Query: 403 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQ------ATVAEISKEEKPSATDAEGSA 564
A SS+ E K K EE ++Q E + E + ++ E SKEE+P + E S+
Sbjct: 322 ASSSQDESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKEASS 381
Query: 565 DSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKA 744
N +K+ ++ ES + E K E + + +K + +
Sbjct: 382 SQE---ENEIKETEIKEKEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSS 438
Query: 745 EAKSADDSAT 774
+ D+ T
Sbjct: 439 NTQKGDEQKT 448
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/88 (25%), Positives = 43/88 (48%)
Frame = +1
Query: 409 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 588
+ E+ EA+ D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 57 NEEVVVEEAEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVEE 111
Query: 589 MVKKIDLAPTVESDAAAIPEIKTPEAAD 672
KK ++ +++ AA E+ +A +
Sbjct: 112 -EKKTEVVEEKQTEVAAAEEVAVEKAEE 138
>At5g03380.1 68418.m00291 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP2
[GI:4097545]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 392
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/86 (20%), Positives = 37/86 (43%)
Frame = +1
Query: 508 VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLA 687
V ++ + K + G+ D + + KI P A P+ +TP ++ +
Sbjct: 51 VEDVKIDYKSNKLTVIGNVDPVEVRDKVADKIK-RPVELVSTVAPPKKETPPSSGGAEKK 109
Query: 688 DNPVDEDKPADISPDAPKAEAKSADD 765
+P E+KPA+ P A + + ++
Sbjct: 110 PSPAAEEKPAEKKPAAVEKPGEKKEE 135
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 451 KVEEPAAQPEDSKTE-VQATVAEISKEEKPSATDAEG--SADSAAIIPNMVKKIDLAPTV 621
K E + P+ + + V E SK+ K + + +A A ++P+ I AP+V
Sbjct: 344 KPSESTSHPDSLNDKTISENVQESSKDAKVDSEACQNHPTASPATVVPDQDSTITAAPSV 403
Query: 622 ESDAAAIPEIKTP 660
+ +A KTP
Sbjct: 404 TQEDSAFNTEKTP 416
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 451 KVEEPAAQPEDSKTE-VQATVAEISKEEKPSATDAEG--SADSAAIIPNMVKKIDLAPTV 621
K E + P+ + + V E SK+ K + + +A A ++P+ I AP+V
Sbjct: 605 KPSESTSHPDSLNDKTISENVQESSKDAKVDSEACQNHPTASPATVVPDQDSTITAAPSV 664
Query: 622 ESDAAAIPEIKTP 660
+ +A KTP
Sbjct: 665 TQEDSAFNTEKTP 677
>At2g37390.1 68415.m04585 heavy-metal-associated domain-containing
protein contains Pfam PF00403: Heavy-metal-associated
domain; similar to copper homeostasis factor (CCH)
(ATX1) (GB:U88711) (TIGR_Ath1:At3g56240) [Arabidopsis
thaliana]
Length = 259
Score = 29.5 bits (63), Expect = 2.6
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 10/130 (7%)
Frame = +1
Query: 418 IPDAEAKSAD--IKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 591
I D AD IK+ A E S +++ S + S T G +AA++ +
Sbjct: 46 IKDGRRSFADDFIKLPTSAEDGEMSNKKLEIYKGRRSITGRRS-TGGGGGGGAAALLKLI 104
Query: 592 VKKIDLAPTVESDAA--AIPEIKTPEAADAPKLADNP------VDEDKPADISPDAPKAE 747
I LA S A A IKTP + L +P VD+D + +AP E
Sbjct: 105 TNDIGLARKSFSCVARPACDLIKTPVGSTRYLLGSDPDSITGSVDQDPAKTVEAEAPAGE 164
Query: 748 AKSADDSATT 777
K+ + TT
Sbjct: 165 DKTLTEKKTT 174
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 292 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKV-EEPA 468
E P + E KKD+ AP ++ + K E+ + + + A + V EE
Sbjct: 73 ETPEVVEIKKDEEAPVETPVV---VEDESKTEEVVEAKKEEEVEEKKTEEAPVVVEEEKK 129
Query: 469 AQPEDSKTEVQATV-AEISKEEK 534
+ E+ K V+A+V A + K ++
Sbjct: 130 PEAEEEKPAVEASVTAPVEKADE 152
>At1g04810.1 68414.m00477 26S proteasome regulatory subunit, putative
contains similarity to 26S proteasome regulatory subunit
S1 SP:O88761, GI:3288594 from [Rattus norvegicus]
Length = 1001
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 613 PTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATT 777
PT +A + K + A+ A+N +E A+ + D +AE+ D +ATT
Sbjct: 839 PTAVLSTSAKAKAKAKKEAEQKAKAENSGNEAGKANAASDEKEAESMQVDSTATT 893
>At4g11860.1 68417.m01887 expressed protein contains Pfam domain
PF04424: Protein of unknown function (DUF544)
Length = 682
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +1
Query: 436 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 615
KS D+ ++ +++ +T SKE T +E + + + +
Sbjct: 336 KSEDLNHDQLSSKQSGGETACDVENVSSSKEAIVDVTSSEALSVDKGNLESAKSESSSES 395
Query: 616 TVESDAAAI-PEIK-TPEAADAPKLADNPVDEDKP 714
++SDAA+I P++ + DAP PV D+P
Sbjct: 396 VLKSDAASIDPDLSCRSQHDDAPNAFIPPVSTDEP 430
>At3g43530.1 68416.m04621 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 615
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Frame = +1
Query: 424 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDA-EGS---------ADSA 573
+ E + + ++++ AQ D++ EV EI KE +D +G+ A+S
Sbjct: 441 EREVREKETEIDKEVAQG-DNEREVGEKETEIDKEVGQGDSDIFDGNKDMELNKEVAEST 499
Query: 574 AIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAK 753
+ K ++ + + A EI PE+ ++AD+ D++ P D D K
Sbjct: 500 IGVAESEKDKEVTESEKDKEVAESEIGVPESEKDIEVADSEKDKEVPQDDEMDGGKVTEP 559
Query: 754 S 756
S
Sbjct: 560 S 560
>At3g01700.1 68416.m00103 arabinogalactan-protein (AGP11) identical
to gi|10880499|gb|AAG24279
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +1
Query: 538 SATDAEGSAD-SAAIIPNMVKKIDLAPTVESD-AAAIPEIKTPEAADAPKLADNPVDEDK 711
S T A +A S+A P + PT E D +AA P ++A+AP ++ P +
Sbjct: 35 SPTKAPAAAPKSSAAAPKASSPVAEEPTPEDDYSAASPS----DSAEAPTVSSPPAPTPE 90
Query: 712 PADISPDAPKAEAKSADDS 768
S D P ++ +A +S
Sbjct: 91 ADGPSSDGPSSDGPAAAES 109
>At2g45800.1 68415.m05696 LIM domain-containing protein similar to
PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
Pfam profile PF00412: LIM domain
Length = 226
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 289 DEVPAIPEAKKDDIAPE 339
D+ +IPEAK+DD APE
Sbjct: 197 DDTASIPEAKEDDAAPE 213
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +1
Query: 403 AKSSEIPDAEAKSADIKVEEPAAQPED-------SKTEVQATVAEISKEEKPSATDAEGS 561
A E P AE ++ VEE AAQPE + E + A K++K + E
Sbjct: 308 AALGETPAAERPASSTPVEEKAAQPEPVAPVENAGEKEGEEETAAAKKKKKKKEKEKEKK 367
Query: 562 ADSAAIIPNMVK 597
A +AA + V+
Sbjct: 368 AAAAAAATSSVE 379
>At1g20530.1 68414.m02558 hypothetical protein
Length = 614
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 601 IDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSAD 762
++ P VES+A PE +PE+ + + D D P D + E + D
Sbjct: 60 VESPPDVESEADESPETYSPESCSSAHSVTSS-DSDLPPKFDSDCEEGEGTNCD 112
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = +1
Query: 523 KEEKPSATDAEGSADSAAIIPNMVK-----KIDLAPTVESDAAAIPEIK---TPEAADAP 678
K+E S + + ++ +I N+V +++AP ++ AA PE K + +
Sbjct: 1306 KKEPKSVSKLDLGSEKVSIPSNLVNGNEQHDLNIAPGEDASAAKQPEKKRSRSKKRKSGN 1365
Query: 679 KLADNPVDEDKPADISPDAPKAEAKSADD 765
L +++ KP+D++ + + E KSA++
Sbjct: 1366 NLDLGKMEKSKPSDLANENEQTEPKSANN 1394
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Frame = +1
Query: 478 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA--PTVESDAAAIPEI 651
ED+K ++ T + + EKPS A + K D+A +E DA +
Sbjct: 3 EDTKATIEPTANKTTSLEKPSEAMAGKENAGGKETQELAKDEDMAEPDNMEIDAQIKKDD 62
Query: 652 KTPEAAD----APKLADNPVDE--DKPADISPDAPKAEAKSADDSA 771
+ E D K DN + ++ +++ D +AEA + D+ A
Sbjct: 63 EKAETEDKESEVKKNEDNAETQKMEEKVEVTKDEGQAEATNMDEDA 108
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +1
Query: 607 LAPTVESDAAAIPEIKTPEA----ADAPK-LADNPVDEDKPADISPDAP 738
L+P S A +P +P+ AD P+ L+ P D KP+ S +AP
Sbjct: 127 LSPKPPSPRAEVPRSLSPKPPSPRADLPRSLSPKPFDRSKPSSASANAP 175
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +1
Query: 607 LAPTVESDAAAIPEIKTPEA----ADAPK-LADNPVDEDKPADISPDAP 738
L+P S A +P +P+ AD P+ L+ P D KP+ S +AP
Sbjct: 126 LSPKPPSPRAEVPRSLSPKPPSPRADLPRSLSPKPFDRSKPSSASANAP 174
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/114 (19%), Positives = 46/114 (40%)
Frame = +1
Query: 430 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 609
E ADI++ + ++ D+ +A +E + +PS D + + AA +V +++
Sbjct: 735 EIADADIEMVDNPSEARDASASTEANGSESEETYEPS--DGDTAHVEAAGESKLVTVMEV 792
Query: 610 APTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSA 771
++ + I E+ T D D V ++P + + D A
Sbjct: 793 EIPEKTHSDVIRELDTKAVGDLAAATDLEVVMEEPCIVEGSVETEDPNPGSDEA 846
>At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +1
Query: 520 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 699
+ EEK E +S A+ N+ ++ D PT + +KT + D L+ N
Sbjct: 276 TNEEKEKDISTENHLESTAL--NIQQQSDSTPTPMEEDVVTETVKTETSEDMKLLSQNSQ 333
Query: 700 DEDKP 714
++ P
Sbjct: 334 EDSSP 338
>At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +1
Query: 520 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 699
+ EEK E +S A+ N+ ++ D PT + +KT + D L+ N
Sbjct: 276 TNEEKEKDISTENHLESTAL--NIQQQSDSTPTPMEEDVVTETVKTETSEDMKLLSQNSQ 333
Query: 700 DEDKP 714
++ P
Sbjct: 334 EDSSP 338
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 585
K+ E E + D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 22 KTVEETVVETEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVE 76
Query: 586 NMVKKIDLAPTVESDAAAIPEIKTPEAAD 672
KK ++ +++ AA E+ +A +
Sbjct: 77 E-EKKTEVVEEKQTEVAAAEEVAVEKAEE 104
>At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containing
protein low similarity to CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 793
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 425 MLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQKKKNL 538
M K+N+ + K+K ++L LK K YK + K Q + L
Sbjct: 740 MEKKNMFVDKYKYRMLFLKYHKTAYKGKAPKVQSESQL 777
>At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family members At5g09530,
At5g09520, At1g44222 [Arabidopsis thaliana]
Length = 144
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 568 SAAIIPNMVKKI-DLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKA 744
S +++ VKK+ + E + PE+ +PE + P+ + P + + P + P+ P+
Sbjct: 35 SHSLVQEEVKKVPEYTEPEEPEVPEEPELPSPEEPEIPEEPEIPEEPEVPGE--PEVPEE 92
Query: 745 EAKSADDSATT 777
+ + +T
Sbjct: 93 PEEPEEPEGST 103
>At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putative
similar to SP|P50855 Riboflavin biosynthesis protein
ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25);
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
synthase)] {Actinobacillus pleuropneumoniae}; contains
Pfam profiles PF00925: GTP cyclohydrolase II, PF00926:
3,4-dihydroxy-2-butanone 4-phosphate synthase
Length = 476
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +1
Query: 553 EGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPD 732
EG S++ I+L P + S E+ P D+P++ D D D+P D
Sbjct: 50 EGDVFSSSKSNGSSMGIELQPDLVSFGTLAAEM-IPTTMDSPEVEDEEFDLDRPTDGFAS 108
Query: 733 APKA 744
P+A
Sbjct: 109 IPQA 112
>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1139
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Frame = +1
Query: 430 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS---AAIIPNMVKK 600
E ADI++ + ++ D+ +A +E + +PS D D+ AA +V
Sbjct: 711 EIADADIEMVDNPSEARDASASTEANGSESEETYEPSDGDTAHVPDTSVEAAGESKLVTV 770
Query: 601 IDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSA 771
+++ ++ + I E+ T D D V ++P + + D A
Sbjct: 771 MEVEIPEKTHSDVIRELDTKAVGDLAAATDLEVVMEEPCIVEGSVETEDPNPGSDEA 827
>At2g02170.1 68415.m00153 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 486
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 424 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 573
+AE K ++KVE + +D + AT+ E EEK +A +A+ +A
Sbjct: 411 EAEMKKTEVKVERIKGRAQDRLMKKLATI-ERKAEEKRAAAEAKKDHQAA 459
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.310 0.126 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,280,983
Number of Sequences: 28952
Number of extensions: 202761
Number of successful extensions: 590
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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