Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0185
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   5.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   9.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.4  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -1

Query: 809 PIEGPTWNSHCKGITSAFVPANRYASIKTASIVGFDKVSGKD 684
           P +  T+N   +G+  AF P     ++   SI G  +V G D
Sbjct: 147 PQDKATFNRLLQGLKDAFAPKGYLLTVAVNSIPG--EVGGYD 186


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 387 SAWLVELPSKFHIGRSL 337
           SA LVEL  +FH G+ L
Sbjct: 97  SAQLVELEREFHHGKYL 113


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 374 TNQADGHNSDTYLVPRA 424
           T QAD  + DT L PRA
Sbjct: 523 TEQADSASVDTRLWPRA 539


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -3

Query: 711 GLRQGLWQRLCWHRH 667
           G  Q +W+   WH H
Sbjct: 39  GPEQQMWEPQMWHHH 53


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -3

Query: 711 GLRQGLWQRLCWHRH 667
           G  Q +W+   WH H
Sbjct: 39  GPEQQMWEPQMWHHH 53


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 387 SAWLVELPSKFHIGRSL 337
           SA LVEL  +FH G+ L
Sbjct: 88  SAQLVELEREFHHGKYL 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,598
Number of Sequences: 336
Number of extensions: 5125
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)