Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0184
         (740 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0356 - 2707820-2708395,2708475-2708705,2709071-2709190,270...    29   3.9  
07_03_1214 + 24931142-24932314,24934177-24934434                       28   9.0  

>12_01_0356 -
           2707820-2708395,2708475-2708705,2709071-2709190,
           2709281-2709401,2711588-2712027
          Length = 495

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -1

Query: 251 NPHSMKSSTVPWILSLYLSCKVNDILPRSASVMSGTSFSSTNIKG 117
           +P S  SS+       YL+    D+LPR +S  SG+S  ST   G
Sbjct: 15  SPASRSSSSSSSSSLRYLATSDGDVLPRRSSSGSGSSLGSTGSLG 59


>07_03_1214 + 24931142-24932314,24934177-24934434
          Length = 476

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 67  DYKKKLDYGLIVTILYCPFMFVDENDVPDITEAD 168
           DY+ K+ +G+I T+ Y   M  DEN+ P+  + D
Sbjct: 138 DYRSKV-FGMIRTLKYLDKMDADENERPESDDDD 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,482,935
Number of Sequences: 37544
Number of extensions: 337485
Number of successful extensions: 592
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)