Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0184
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF068718-5|AAC17768.1|  320|Caenorhabditis elegans Hypothetical ...    31   0.86 
AF026209-6|AAB71281.1|  340|Caenorhabditis elegans Serpentine re...    28   6.0  
U80447-10|AAB37814.1|  477|Caenorhabditis elegans Hypothetical p...    28   8.0  
AF016676-2|AAG24106.1|  500|Caenorhabditis elegans Cytochrome p4...    28   8.0  

>AF068718-5|AAC17768.1|  320|Caenorhabditis elegans Hypothetical
           protein R01B10.4 protein.
          Length = 320

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = -1

Query: 590 LCHKVRFDSRSDYLCNISVAV*LYILFSCMYFRHPKCRKKNLFKVSVFDIFILK 429
           L H ++     DY  N++  +   ++ +C+Y  H   RK+NL  +   DI +++
Sbjct: 204 LNHFMKMMQNFDYGYNMTCCIVFSLITTCLYVHHLYYRKRNLGSLQESDIVLIR 257


>AF026209-6|AAB71281.1|  340|Caenorhabditis elegans Serpentine
           receptor, class j protein24 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 73  KKKLDYGLIVTILYCPFMFV 132
           K  + YGL++TILYC F F+
Sbjct: 125 KHFVPYGLLITILYCLFHFM 144


>U80447-10|AAB37814.1|  477|Caenorhabditis elegans Hypothetical
           protein F55F8.9 protein.
          Length = 477

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 321 SSNKKIVFLLRRYGQRTGLVPLN*SPFNEVLNSSLDF 211
           +++KKIVF  RRYG+R        S +   LN  L F
Sbjct: 217 ATHKKIVFKNRRYGRRISRNQNRFSSYGSTLNGDLLF 253


>AF016676-2|AAG24106.1|  500|Caenorhabditis elegans Cytochrome p450
           family protein 33C3 protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 4   NFLEYFDISIESVYSKTDFDNDYKKKLDY 90
           NF  +FD  IE+   K DFD+  ++ LDY
Sbjct: 240 NFYSFFDTQIENHRKKIDFDS--QESLDY 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,800,399
Number of Sequences: 27780
Number of extensions: 360656
Number of successful extensions: 786
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)