Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0184
         (740 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g13550.1 68414.m01588 expressed protein  ; expression support...    31   1.1  
At1g13530.1 68414.m01586 expressed protein  ; expression support...    29   3.2  

>At1g13550.1 68414.m01588 expressed protein  ; expression supported
           by MPSS
          Length = 394

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +1

Query: 82  LDYGLIVTILYCPFMFVDENDVPDITEADLGNISFTLHDKYKD 210
           LD  ++V   Y PF+FV E D+ D  +  +   + TLH ++++
Sbjct: 218 LDISVVVGKWYVPFIFVKEGDIIDQVKISM-YYNMTLHQRWEE 259


>At1g13530.1 68414.m01586 expressed protein  ; expression supported
           by MPSS
          Length = 385

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 85  DYGLIVTI--LYCPFMFVDENDVPDITEADLGNISFTLHDKYKD 210
           D+G  V +   Y PF+FV E D  D  +  +   S TLH ++++
Sbjct: 207 DFGKSVVVGKWYVPFLFVKEGDAKDQMKKSM-YYSMTLHQRFEE 249


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,357,172
Number of Sequences: 28952
Number of extensions: 317167
Number of successful extensions: 680
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)