Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0182
(739 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.09 |||NST UDP-N-acetylglucosamine transporter|Schizosac... 28 1.6
SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces... 27 2.1
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 27 3.7
SPBC16E9.05 |erg6||delta-sterol C-methyltransferase |Schizosacch... 26 6.4
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 26 6.4
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 26 6.4
SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 6.4
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 25 8.5
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 25 8.5
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 25 8.5
>SPBC1734.09 |||NST UDP-N-acetylglucosamine
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 205 EWKDELFGCDFLAAPVSLFKHAPLHEMWDNTF 300
+W++ LF L+ P LF P+ W++ F
Sbjct: 185 DWRESLFYTHALSLPFFLFLLRPIRSQWNDLF 216
>SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 27.5 bits (58), Expect = 2.1
Identities = 21/81 (25%), Positives = 35/81 (43%)
Frame = -1
Query: 364 NH*VFQNNYHSLYSSLQPSCPQMCYPTFHEEVHV*KDSLVQQGNRNQITHLSIHNCSQLK 185
NH + N + S SL S MC+P F + + L + IT + +C Q+
Sbjct: 21 NHGIVGNMHTSAMISLDGSVEMMCWPNF-DSPSIFARILDARAGHFSITPIEQTSCKQMY 79
Query: 184 LPIV*WDLPVNHSKWHAIAGV 122
P + H+K+++ GV
Sbjct: 80 EP----STNILHTKFYSERGV 96
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 108 QWNHPCHVICTLH*FESPINVFSSRKT 28
+WN P HV H + S I+ F +K+
Sbjct: 434 EWNKPVHVFLMRHVYHSSISGFKLKKS 460
>SPBC16E9.05 |erg6||delta-sterol C-methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +1
Query: 280 EMWDNTFEGMKVEVKNTDCDNYSEKLSDYFWVATVLKVKGYMGLLRYEGF 429
E WD E E + D Y ++ Y+ +AT L G+ + F
Sbjct: 50 EFWDRNHENESEEDRARRIDGYKSVVNSYYDLATDLYEYGWSQSFHFSRF 99
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +1
Query: 316 EVKNTDCDNY---SEKLSDYFWVATV 384
+VKN CDNY +EKL++ F +A V
Sbjct: 69 QVKNWVCDNYINYTEKLTEIFSMANV 94
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 25.8 bits (54), Expect = 6.4
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 43 KHINWRFKLMEGTDHMAGMIPLEPLPQLQQWHATLSDLQAGPIKQSAASVANSY 204
+HI W + G HMAG L H + GP +++AAS+ N Y
Sbjct: 583 EHIYW---INGGDIHMAGQFSYLSNSLLLNVHRYVESHLNGPTERTAASLTNWY 633
>SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 578
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 30 FFETKTH*LEIQTNGGYRSHGRDDSTGAFTPTPAMACHF 146
F + + L+++ G+ SHGRD S + T +P HF
Sbjct: 379 FMDDYVNELQLEIVPGF-SHGRDSSDTSCTESPPEPSHF 416
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 256 LFKHAPLHEMWDNTFEGMKVEVKNTDCDNYSEKLSDY 366
L +H PL E D+T +K ++ ++ D+Y K + +
Sbjct: 537 LEEHLPLSEHDDDTLANLKKDLSSSFFDHYMSKSNSW 573
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 25.4 bits (53), Expect = 8.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 376 ATVLKVKGYMGLLRYEGFGSD 438
+ ++K G GL+RY+G G D
Sbjct: 154 SNLMKTLGKYGLVRYDGIGED 174
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 592 RTLPANFYSK-LNDSLVSRVFYWIINGKFVDK 684
R +P NF K L + VF WI+N +F K
Sbjct: 1137 RCVPNNFLRKVLPVKTIDTVFSWILNPRFRSK 1168
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,268,629
Number of Sequences: 5004
Number of extensions: 72309
Number of successful extensions: 189
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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