Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0182
         (739 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0534 + 18285477-18285689,18286189-18286348,18287924-182881...    30   2.2  
03_05_0280 - 22671786-22672208                                         30   2.2  
05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273,313...    29   2.9  
04_04_1255 + 32119565-32119685,32120052-32120218,32120332-321205...    29   2.9  
08_02_0544 + 18445810-18445995,18446894-18447053,18448186-184483...    29   3.9  
06_03_0052 - 16027570-16027617,16027789-16027795,16028103-160283...    29   3.9  

>08_02_0534 +
           18285477-18285689,18286189-18286348,18287924-18288124,
           18288216-18288280,18288465-18288492,18288568-18288629,
           18288885-18288971,18289310-18289360,18289663-18289884,
           18291148-18291241,18291349-18291489,18291587-18291672
          Length = 469

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 340 NYSEKLSDYFWVATVLKVKGYMGLLRYEGFG 432
           NY    S ++WV  +L++   +G+  YEG G
Sbjct: 273 NYMPTCSTWYWVLNLLQIPVSVGVTMYEGLG 303


>03_05_0280 - 22671786-22672208
          Length = 140

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +1

Query: 217 ELFGC-DFLAAPVSLFKHAPLHEMWD 291
           EL GC  F A P+  F H P+ + WD
Sbjct: 6   ELIGCVTFTARPIQEFLHIPMKDKWD 31


>05_01_0397 -
           3129679-3130144,3130655-3131104,3132215-3132273,
           3133136-3133305,3134655-3134771,3134980-3135166
          Length = 482

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 211 SIHNCSQLKLPIV*WDLPVNHSKWHAIAGVGVKAPVESSLPCDLY 77
           S+ + S   +P    D P  H  WH +AG     P++S  P D +
Sbjct: 229 SLASSSSSHVPERTMDGPAYHDPWHPLAGPSDGRPLQSVQPADFH 273


>04_04_1255 +
           32119565-32119685,32120052-32120218,32120332-32120532,
           32120700-32120747,32121079-32121238,32121540-32121777,
           32121874-32122021
          Length = 360

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = +1

Query: 145 LSDLQA-GPIKQSAASVANSYEWKDELFGCDF---LAAPVSLFKHAPLHEMWDNTFEG 306
           L DLQA GP+K   A +     + D + GCD+   +AAP++     P  ++ +    G
Sbjct: 49  LKDLQALGPLKVFRADMDEEGSFDDAIAGCDYAFLVAAPMNFNSENPEKDLVEAAVNG 106


>08_02_0544 +
           18445810-18445995,18446894-18447053,18448186-18448386,
           18448474-18448538,18448697-18448761,18448784-18448874,
           18448965-18449051,18449204-18449254,18449604-18449825,
           18449987-18450080,18450159-18450299,18450391-18450476
          Length = 482

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 340 NYSEKLSDYFWVATVLKVKGYMGLLRYEGFG 432
           NY    S ++WV   L++   +G+  YEG G
Sbjct: 286 NYMPTCSTWYWVLNFLQIPVSVGVTMYEGLG 316


>06_03_0052 -
           16027570-16027617,16027789-16027795,16028103-16028341,
           16028432-16028566,16028670-16028888
          Length = 215

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 587 PVSCLTRNFFQSVYLSSIVRGGMSGLP 507
           P + ++ NFF   YL ++V+ G SGLP
Sbjct: 158 PYTFVSCNFFAGYYLPTLVQPGASGLP 184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,357,420
Number of Sequences: 37544
Number of extensions: 440899
Number of successful extensions: 1058
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)