Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0182
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71266-10|CAA95838.3|  491|Caenorhabditis elegans Hypothetical p...    42   6e-04
Z36238-5|CAA85277.1|  381|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    28   7.9  
AC024202-7|AAK93868.3|  227|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z71266-10|CAA95838.3|  491|Caenorhabditis elegans Hypothetical
           protein R06C7.7 protein.
          Length = 491

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 28/111 (25%), Positives = 50/111 (45%)
 Frame = +1

Query: 199 SYEWKDELFGCDFLAAPVSLFKHAPLHEMWDNTFEGMKVEVKNTDCDNYSEKLSDYFWVA 378
           ++ W + L        P+ LFK  P  E  D    G+++E  +  C+N       +   A
Sbjct: 386 TFRWDEYLEKESAETLPLDLFKPMPSQERLDKFKVGLRLEAADM-CEN------QFICPA 438

Query: 379 TVLKVKGYMGLLRYEGFGSDDSKDFWVNLCCSEVHPVGWCATRGKPLIPPR 531
           TV  V G +  + ++G+  D+  D   ++   ++ P+GWC      L PP+
Sbjct: 439 TVKSVHGRLINVNFDGW--DEEFDELYDVDSHDILPIGWCEAHSYVLQPPK 487


>Z36238-5|CAA85277.1|  381|Caenorhabditis elegans Hypothetical
           protein R74.6 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 375 YPKVITKFFRIIITVCILHFNLHALKCVI 289
           + K + KF+  + T  + H NL  +KCVI
Sbjct: 178 HEKGLEKFYEAVSTAFMRHVNLQVVKCVI 206


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = +1

Query: 169 IKQSAASVANSYEWKDELFGCDFLAAPVSLFKHAPLHEMWDNTFEGMKVEVKNTDCDNYS 348
           I+   + V  SY + +    C+ + A   +   +PL  M  N F G        DC N+S
Sbjct: 235 IRSRISDVCRSYTYDNSTNECNLMWASARMLGRSPLESMKPNLFHG-----DLDDCVNFS 289

Query: 349 EK 354
            K
Sbjct: 290 LK 291


>AC024202-7|AAK93868.3|  227|Caenorhabditis elegans Hypothetical
           protein Y71H2B.11 protein.
          Length = 227

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +1

Query: 262 KHAPLHEMWDNTFEGMKVEVKNTDCDNYSEKL 357
           K+A     WD  F+  K EVK TD   YS KL
Sbjct: 182 KNAATSSTWDKHFDNSKYEVKTTD---YSWKL 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,015,485
Number of Sequences: 27780
Number of extensions: 407680
Number of successful extensions: 929
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)