Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0181
(768 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 60 3e-10
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 54 2e-08
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 45 1e-05
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 44 2e-05
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 42 1e-04
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 34 0.026
SPBC29A3.05 |||chromatin remodeling complex subunit|Schizosaccha... 32 0.10
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 28 1.3
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 3.9
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 27 3.9
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 26 5.2
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 26 6.8
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 25 9.0
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 25 9.0
SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 9.0
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 60.1 bits (139), Expect = 3e-10
Identities = 35/118 (29%), Positives = 57/118 (48%)
Frame = +3
Query: 258 RRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPE 437
RR LK L NQ+ E KD ++ ++A E+ + + TL ++ +P
Sbjct: 49 RRNFLKALKENIIRNQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPT 108
Query: 438 HPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 611
P + + +P GV+ + +WNYPL L P+ A+ AGN ++VK SEL+
Sbjct: 109 KRPNSLLTSYKGGYVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELT 166
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 54.0 bits (124), Expect = 2e-08
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +3
Query: 492 PYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSV-ACSNFVVENLPKYLDNDA 668
P GV+ VI WN+PL++ L + AIA+GN V++KPSEL+ +C F + L +
Sbjct: 162 PRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELAPWSCLEFALICKEAGLPDGV 221
Query: 669 FIVFEGGPQETTELLK--QRFDYIFYTGGTNVGR 764
V G +E+ L + Y+ +TG G+
Sbjct: 222 LNVIIGSGKESGAALSCHPKIAYLAFTGSLATGK 255
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 44.8 bits (101), Expect = 1e-05
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +3
Query: 486 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSNFVVENLPKY-LDN 662
++P GV I WN+P + +A A+A GNT+I+K +EL+ + + + +P+
Sbjct: 158 HEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLSALCLTKFVPECGFPP 217
Query: 663 DAFIVFEGGPQETTELLKQRFDY--IFYTGGTNVGRI 767
V G + + D + +TG T VGR+
Sbjct: 218 GVINVLSGDGRRCGNAISSHMDIDKVAFTGSTGVGRM 254
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 44.0 bits (99), Expect = 2e-05
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Frame = +3
Query: 459 NILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE----LSVACSN 626
N + ++ P GVV +I WN+P ++ + A+AAG TV+++P+ ++A +
Sbjct: 148 NPQNRIITIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTALALAK 207
Query: 627 FVVE-NLPKYLDN--DAFIVFEGGPQETTELLKQRFDYIFYTGGTNVGRI 767
+P + N A E G + TT L ++ + +TG TNVG+I
Sbjct: 208 LAERAGVPAGVLNMVTANSPSEHGIELTTNPLIRK---VSFTGSTNVGKI 254
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 41.5 bits (93), Expect = 1e-04
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +3
Query: 492 PYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE---LSVACSNFVVE--NLPKYL 656
P GV I WNYPL + +A A+AAGN +I+K +E LS+ +VE PK +
Sbjct: 154 PIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLVEEAGFPKGV 213
Query: 657 DNDAFIVFEGGPQETTELLKQ-RFDYIFYTGGTNVGRI 767
N I+ G + + K D I +TG T VG I
Sbjct: 214 VN---IISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVI 248
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 33.9 bits (74), Expect = 0.026
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Frame = +3
Query: 474 VVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPS-ELSVACSNFV-VENLP 647
++ P GV +I WN+P ++ A+AAG T I P+ C V +
Sbjct: 148 LISIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYVCLGLVRLAQEA 207
Query: 648 KYLDNDAFIVFEG-----GPQETTELLKQRFDYIFYTGGTNVGRI 767
+ D ++ G + TT + ++ + +TG TNVG+I
Sbjct: 208 GFPDGVLNVITSSDASAHGKELTTNPIVRK---VSFTGSTNVGKI 249
>SPBC29A3.05 |||chromatin remodeling complex
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 139
Score = 31.9 bits (69), Expect = 0.10
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Frame = +3
Query: 201 AVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDY 380
AVQK + R P+ RQ +NL + ++N + + + KDL + ++ + + V
Sbjct: 9 AVQKRKKQKQRSVVDPVTRERQLKRNLADLEKDNFSDIRFEIPKDLLQRRV--LPISVRR 66
Query: 381 LINDLRNTLHYLDEW---------TKPEH-PPKGFVNI 464
+++ + ++YLDE KP + PP+ F N+
Sbjct: 67 ILSSRKTFVNYLDETPNSRYNTCVAKPSYKPPRKFCNV 104
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 276 NLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTL 407
+LL++Y + +E + KDL RS E + + IN LRN L
Sbjct: 249 HLLKVYSGQTSFSLEEIEKDLGRSLPEYPAYQNEEGINALRNVL 292
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 168 TSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQQLKNL 281
TSK T SAA+ K + + T++PI +++ L
Sbjct: 202 TSKPATTSAAQPSSKVEENMAKATSQPITTAEKEIPEL 239
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 599 GFHDNRVPGSDGSGHRQKQQLQGIVPGAYYEDDA 498
GFH RVP SD +G +Q+QQ + V A+ + A
Sbjct: 564 GFHVVRVP-SDAAGFQQRQQQEEGVLEAHTNESA 596
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 544 SSCKG*FQAPITRTTPYGSLYITTSSRMFTK 452
S K F+ I +TTPYGS T S ++ TK
Sbjct: 220 SKLKNNFRGIIYKTTPYGSCNDTESLQVDTK 250
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 154 TGILQHPNKRRCQLLRPSKKLETLSIAAQPGR*NGAVSSSRI 279
+G+LQ +KR P K ++ S QP R +GA S++ +
Sbjct: 138 SGLLQSKDKRSQSPHSPKKPVKNSSSRDQPVRNSGATSTASL 179
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 270 LKNLLRMYEENQNVMVEALHKDLRRSK-MEAILLEVDYLIND 392
LKNLL + +++ EAL+K L +K + +L E + LIN+
Sbjct: 255 LKNLLEVKDKDVEGRNEALNKILHPAKNLVELLTEKENLINE 296
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 602 AGFHDNRVPGSDGSGHRQKQQLQGIVPG 519
+G H V G G+ H + +L G PG
Sbjct: 323 SGTHGTHVAGIIGANHPETPELNGAAPG 350
>SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 578
Score = 25.4 bits (53), Expect = 9.0
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 206 PKSSRHFQSRHNQADRMAP--SAAQEFVKNVRGKPKRHGGGPTQ 331
PKSS HF RH DR S ++ + +N K K+ GP Q
Sbjct: 492 PKSSHHFDERHG-GDRHEKNLSNSRRYSRNKFHK-KKQSSGPFQ 533
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,965,760
Number of Sequences: 5004
Number of extensions: 61587
Number of successful extensions: 176
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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