Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0181
(768 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 5e-39
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 53 2e-07
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 49 5e-06
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 42 7e-04
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 41 0.001
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 41 0.001
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 40 0.002
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 37 0.016
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 36 0.027
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 31 1.0
SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_325| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_5253| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_38362| Best HMM Match : BRCT (HMM E-Value=0) 28 7.2
SB_31305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 158 bits (383), Expect = 5e-39
Identities = 72/163 (44%), Positives = 107/163 (65%)
Frame = +3
Query: 279 LLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFV 458
++++ +++++ +V AL KDL + + E ++ E+ ND L L EW KP+ G V
Sbjct: 1 MVQLLDKHEDEIVAALKKDLCKPRQETVIAEILLAKNDAILALEKLSEWMKPQPVETGIV 60
Query: 459 NILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSNFVVE 638
N +D I N+P GV L+I AWNYP+QL+ LP+ GAIA GN ++KPSE++ A + V +
Sbjct: 61 NKMDTCYIKNEPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSEVASATAQLVAD 120
Query: 639 NLPKYLDNDAFIVFEGGPQETTELLKQRFDYIFYTGGTNVGRI 767
+PKYLD D + V GG ET +LL Q+FD IFYTGG+ VG++
Sbjct: 121 LVPKYLDPDCYPVVNGGVPETQQLLNQKFDKIFYTGGSAVGKL 163
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Frame = +3
Query: 489 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSEL----SVACSNFVVE-NLPKY 653
+P GVV IGAWNYP+Q +A AIA GNT++ KPS L +VA ++ + E +P
Sbjct: 409 EPLGVVGGIGAWNYPIQTACWKIAPAIACGNTIVYKPSPLTPMNAVALADILTEAGVPPG 468
Query: 654 LDNDAFIVFEGGPQETTELLKQ--RFDYIFYTGGTNVGR 764
+ N + +GG ET E+L + + +TG G+
Sbjct: 469 VVN----IIQGG-GETGEMLSKDPNVAKVSFTGSVPTGQ 502
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 52.0 bits (119), Expect = 5e-07
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 2/203 (0%)
Frame = +3
Query: 165 TTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 344
+T++ +T +AV+ AR F + P R + L ++ R +++ ++ D +
Sbjct: 672 STTQGETQDIEDAVKAARTAFQSWSKLPGHARARHLYSIARHVQKHARLIAVLESMDNGK 731
Query: 345 SKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAW 524
S E ++ N R+ H+ G+ ++D + P GVV I W
Sbjct: 732 SVRETRDCDIP---NVARHLYHHA-----------GWAQLMDTEMQGWKPVGVVGGIVPW 777
Query: 525 NYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSNFVVENLPKY-LDNDAFIVFEGGPQET 701
N+PL LL + A+A GNTV++KP+ + + E + L F V G
Sbjct: 778 NFPLMLLCWKVCPALAMGNTVVLKPATYTRLSALLFAEICAEAGLPPGVFNVVTGNGAFG 837
Query: 702 TELL-KQRFDYIFYTGGTNVGRI 767
++L D + +TG T VG++
Sbjct: 838 SQLAGHPDVDKVAFTGSTEVGKL 860
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 411 YLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVI 590
+ D+ TKPE P + ++P GV+ + L + +A AI GNTV+
Sbjct: 1269 FSDKDTKPEETP-----FYGATIKIHEPVGVIGIACPDECSLLAFVSLLAPAIIRGNTVV 1323
Query: 591 VKPSE 605
+ PSE
Sbjct: 1324 IVPSE 1328
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 48.8 bits (111), Expect = 5e-06
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Frame = +3
Query: 459 NILDEVVIYN----DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSN 626
N L+ + N P GV +I WN PL LL +A A+A+G TV+ KPSE++ +
Sbjct: 131 NFLESQAVVNYSLRSPKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMTSVTAW 190
Query: 627 FVVE--NLPKYLDNDAFIVFEGGPQETTELLKQ-RFDYIFYTGGTNVGRI 767
+ E N + IVF G + + +++ I +TG T +G +
Sbjct: 191 MMAELINDAGFPPGVINIVFGTGSRTGSAIVQHPDVHLISFTGSTTIGEL 240
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Frame = +3
Query: 486 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSNFVVENLPKYLDND 665
++P G+V I WN+PL + + +A A+A GN VI+KP+E + + + L K
Sbjct: 465 HEPVGLVGAITPWNFPLNMASVKIAPALACGNVVILKPAEQTPLTALYFCA-LVKEAGFP 523
Query: 666 AFI--VFEG-GPQETTELLKQ-RFDYIFYTGGTNVGRI 767
A + V G GP + D + +TG T VGR+
Sbjct: 524 AGVVNVIPGYGPTAGAAITTHLDIDKVSFTGSTEVGRL 561
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 471 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPS 602
+V+I +P GV I WN+P+ +L+ + AIA G T+I +PS
Sbjct: 74 KVLITKEPVGVCASITPWNFPIAMLVRKASSAIACGCTMIARPS 117
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 504 VLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACS 623
+L WN+PL ++ A A+AAG TVI+KPSE + C+
Sbjct: 143 LLTTEQWNFPLGMITRKAAAALAAGCTVIIKPSEETPFCA 182
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 486 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 605
++P GVV I WN+PL + L +A A+A G VI+KP+E
Sbjct: 1335 HEPVGVVGAITPWNFPLLMEGLKLAPALACGCVVILKPAE 1374
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 40.3 bits (90), Expect = 0.002
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Frame = +3
Query: 192 AAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLE 371
A A ++A D +P+E R++ L N + E+N ++ E D +S + A ++
Sbjct: 86 AVMAARQAFDDSPWSRIKPVE-RQKLLWNFADLIEKNAALLAEIESIDNGKSAVIAEHVD 144
Query: 372 VDYLINDLRNTLHYLDEWTKPE-HPPKGFVNILDEVVIYN----DPYGVVLVIGAWNYPL 536
+ ++ LR + TK E + V + + + + GVV I AWN+PL
Sbjct: 145 IRLAVDFLRYMAGFA---TKIEGRTVQVSVPFMPDAQFHGYTRREAVGVVGAIVAWNFPL 201
Query: 537 QLLLLPMAGAIAAGNTVIVKPSE 605
L + A+A G T ++KP+E
Sbjct: 202 LLACWKLGPALATGCTTVLKPAE 224
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 37.1 bits (82), Expect = 0.016
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +3
Query: 471 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSNFVVENLPK 650
E+ +P GVV +I WN+P +A A+A GN ++ KP+ A + + E + +
Sbjct: 134 EIETRREPVGVVGIITPWNFPTATGAWKIAPALAFGNAIVWKPANQVPASAWALTEIISR 193
Query: 651 Y-LDNDAFIVFEGGPQETTELL--KQRFDYIFYTGGTNVGR 764
L F + G + +++ + + + +TG GR
Sbjct: 194 QNLPAGTFNLVMGPGADVGDVMINSRGINALTFTGSLETGR 234
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 37.1 bits (82), Expect = 0.016
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Frame = +3
Query: 87 VSIQIDKVRGSNKSEXXXXXXXXXXLTTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQ 266
+ +++D ++G ++ E ++ + + A DT +RG +E ++
Sbjct: 97 LQLELDIMKGEHEMEITMLKKEIQAERVRLEQRKAKLDVADDASDTSSRGPYPAVEAIQE 156
Query: 267 QLKNLLRMYEENQNVMVEALHKDLRRS-----KMEAILLEVDYLINDLRNTLHYLDEWTK 431
Q+ +L YEE + E L + + R+ K E + +N+L+NT E +
Sbjct: 157 QMSSLQANYEEEIQTVKEQLQEQMLRANEAVEKYEQQEYQFHENLNELKNTFAQEQEMMR 216
Query: 432 PEH 440
EH
Sbjct: 217 EEH 219
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 498 GVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 611
GVV +I +W+ L +L + A+A+GN V++KPS L+
Sbjct: 153 GVVAIITSWSQALPSILRHLVPAMASGNCVVIKPSCLA 190
>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
Length = 599
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 165 TTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 344
TT ++T+ E K + F +G +E RRQ L++ L+ +E + A + +R
Sbjct: 81 TTDDKRTIFTFE--DKRKQNFEKGRLE-LEKRRQDLQDKLKREKEEREAKERAEEERRQR 137
Query: 345 SKMEA 359
+KMEA
Sbjct: 138 AKMEA 142
>SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 171 SKQKTMSAAEAVQKARDTFNR--GTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 344
+K+ ++A + ++ N+ GT IE++R+ L+ E +N+ A K L+
Sbjct: 57 NKRTALNALKRKKRLEKQLNQIDGTLSTIEFQREALEGANTNTEVLKNMSYAA--KALKA 114
Query: 345 SKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDE 473
+ + + +V +++D++ DE ++ P GF +DE
Sbjct: 115 AHQQLDVDDVHDMMDDIQEQTELADEISRAISEPAGFGMDIDE 157
>SB_325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 646 GRFSTTKFEQATDSSLGFTITVFPAAMAPAIGKSSS 539
G F T F + DSSL + +FP A+ IG SS
Sbjct: 6 GEFPTWLFCRFADSSLSYQFFLFPTALESFIGARSS 41
>SB_5253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 288 MYEENQNVMVEALHKDLRRSK--MEAILLEVDYLINDLRNTLHYLDEWTKPEHPPK 449
+Y E + KDL S + ++++ YL ++ + + DEW K E PPK
Sbjct: 68 LYAERLRLKPTTSSKDLSSSDVFLISVMVASKYLYDEGEDEEVFNDEWAKAEDPPK 123
>SB_38362| Best HMM Match : BRCT (HMM E-Value=0)
Length = 1572
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 605 FAGFHDNRVPGSDGSGHRQKQQ 540
F +NR PG+DG G R K Q
Sbjct: 474 FPSLKENREPGADGKGKRSKTQ 495
>SB_31305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 216 ELFGRPQQLTSSFVWML*DSRFHSSYCCFHFYYFRALY--RFVCSH 85
EL + QQ F+W+ S HSS+ +YY +L RFV S+
Sbjct: 263 ELKRKQQQEVDIFIWLDHSSCDHSSFTLIGYYYSVSLQIDRFVSSN 308
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,493,214
Number of Sequences: 59808
Number of extensions: 458714
Number of successful extensions: 1361
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -