Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0178
         (479 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...   108   1e-25
AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein ...    26   0.77 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.3  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   1.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   2.4  

>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score =  108 bits (259), Expect = 1e-25
 Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
 Frame = -2

Query: 475 TASSGSDDWPRYSIVGERGPNSQYTMHAHDAETNVMFYAEVGRDAFSCWNTGKPLTPSNV 296
           TAS  S     + ++G RG  SQ ++HA D ET V+F+A + ++A  CW++ KP  P N+
Sbjct: 286 TASQRSWHGTDFQLLGYRGSKSQSSIHAFDPETGVIFFALIQQNAILCWDSNKPFAPQNM 345

Query: 295 EILAKDAIRXSYPSDLHI-TDGEVWLMANSLPRFGYXRLDTNEYNFFIYRANIRDAIYGT 119
            I+ K+     YP+DL I  +G VW M NS+ +  Y +L+ +E+NFF++RANI+  I GT
Sbjct: 346 AIVYKNDRDIVYPNDLSIDQNGYVWFMTNSIIKLLYTQLNLDEFNFFVWRANIKQIIKGT 405

Query: 118 TC 113
            C
Sbjct: 406 VC 407


>AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein S18
           protein.
          Length = 46

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 344 VPADFGVKHYVGLRVMGMH 400
           + A  G++HY GLRV G H
Sbjct: 11  IHAHRGMRHYWGLRVRGQH 29


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 311 QGLPSVPAGEGVPADFGVKHYVGLRVMGMHG 403
           QG+P  P  EG+P D G K   G   +GM G
Sbjct: 449 QGVPGRPGPEGMPGDKGDKGESG--SVGMPG 477


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = -2

Query: 262 YPSDLHITDGEVWLMANSLP-RFGYXRLDTNEYNFFIYRANIRDAIYGTTCSGR*YFKFI 86
           + + LH+TDG+V L + SL  R G  + DT    +F    N         C+    F ++
Sbjct: 643 WSTSLHVTDGKVVLRSRSLNIRRGIFQGDTFSTLWFCLAMNPLSRTLNQQCN----FGYL 698

Query: 85  TSNEQQYGEINCNFY 41
             +E+    I   F+
Sbjct: 699 LKSEEISTRITHTFF 713


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 308 RQGLPSVPAGEGVPADFGVKHYVGLRVMGMHG 403
           R G+P  P   G+P   GVK   GL ++G  G
Sbjct: 79  RDGMPGAP---GLPGSKGVKGDPGLSMVGPPG 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,148
Number of Sequences: 2352
Number of extensions: 8429
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)