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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0177
         (763 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.036
SB_59302| Best HMM Match : Collagen (HMM E-Value=0)                    35   0.063
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.11 
SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.25 
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.25 
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)                   33   0.25 
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.44 
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.44 
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.44 
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)                 32   0.44 
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.58 
SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)               31   0.77 
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.77 
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.0  
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)               31   1.0  
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.4  
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)              30   1.8  
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)                30   2.4  
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)               30   2.4  
SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3)                29   3.1  
SB_33344| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)              29   3.1  
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)            29   4.1  
SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055)              29   4.1  
SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_13891| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_28322| Best HMM Match : Ion_trans (HMM E-Value=1.6e-41)             29   5.5  
SB_28017| Best HMM Match : GTF2I (HMM E-Value=2.3)                     29   5.5  
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.5  
SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_38437| Best HMM Match : VWA (HMM E-Value=0)                         28   7.2  
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.2  
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)                 28   7.2  
SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)             28   7.2  
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)                  28   7.2  
SB_585| Best HMM Match : G_glu_transpept (HMM E-Value=0.00035)         28   7.2  
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)                28   9.5  
SB_28631| Best HMM Match : Drf_FH1 (HMM E-Value=0.35)                  28   9.5  
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)               28   9.5  

>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 35.9 bits (79), Expect = 0.036
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P   P   P  P P  P+ P P  P+ P P+   PP+   P    P
Sbjct: 186 PYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNP 231



 Score = 34.7 bits (76), Expect = 0.083
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
           P   P   P  P P  P  P P  P+ P P+   PP   AP
Sbjct: 107 PYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAP 147



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 20/62 (32%), Positives = 22/62 (35%)
 Frame = +2

Query: 578 PRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQR 757
           P   N P P +     P   P   P  P P  P  P P  P  P P+   PP   AP   
Sbjct: 162 PPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPP 221

Query: 758 MP 763
            P
Sbjct: 222 YP 223



 Score = 33.5 bits (73), Expect = 0.19
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
           P   P   P  P P  P  P P  P+ P P+   PP    P
Sbjct: 115 PYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPP 155



 Score = 32.7 bits (71), Expect = 0.33
 Identities = 15/46 (32%), Positives = 17/46 (36%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P   P   P  P P  P  P P  P+ P P+   PP    P    P
Sbjct: 123 PYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPP 168



 Score = 32.3 bits (70), Expect = 0.44
 Identities = 21/66 (31%), Positives = 25/66 (37%)
 Frame = +2

Query: 566 GGDEPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQA 745
           GG  P   + P P      +P   P   P  P P  P  P P  P+ P P+   PP   A
Sbjct: 81  GGHPPTNFS-PNPPYPPPPYPPYPPPP-PYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNA 138

Query: 746 PEQRMP 763
           P    P
Sbjct: 139 PYPPSP 144



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +2

Query: 593 FPEPQSQVFAFPLTGPVRLPLRPQ-PETPSGPEPRMPFGPGPDGRMPPFAQAP 748
           +P P +  +  P   P   P  P  P  P+ P P  P+ P P+   PP+   P
Sbjct: 187 YPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNP--PYPPPPNAPNPPYPPPP 237



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/57 (29%), Positives = 21/57 (36%)
 Frame = +2

Query: 593 FPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           +P P +  +  PL  P   P  P    P  P P  P  P P    PP+   P    P
Sbjct: 148 YPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNP 204



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/57 (28%), Positives = 20/57 (35%)
 Frame = +2

Query: 593 FPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           +P   +  +  P   P   PL P P  P  P    P  P P    PP+   P    P
Sbjct: 140 YPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYP 196



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
 Frame = +2

Query: 593 FPEPQSQVFAFPLTGPVRLPLR-PQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           +P P +  +  P   P   P   P P  P+ P P  P  P P    PP A  P    P
Sbjct: 179 YPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPP 236



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
 Frame = +2

Query: 593 FPEPQSQVFAFPLTGPVRLPLR-PQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           +P P +  +  P   P   P   P P +P+ P P  P  P P    PP    P    P
Sbjct: 116 YPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAP 173



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQ 742
           P   P   P  P P  P+ P P  P  P P    PP  Q
Sbjct: 202 PNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPPPNPQ 240


>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
          Length = 993

 Score = 35.1 bits (77), Expect = 0.063
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +2

Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
           GP  LP  P P+ P GP P +P  PGP+G  PP    P
Sbjct: 450 GPPGLPGPPGPQMPPGP-PGLPGAPGPNG--PPGINGP 484



 Score = 35.1 bits (77), Expect = 0.063
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +2

Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
           GP  LP  P P+ P GP P +P  PGP+G  PP    P
Sbjct: 535 GPPGLPGPPGPQMPPGP-PGLPGAPGPNG--PPGINGP 569



 Score = 34.7 bits (76), Expect = 0.083
 Identities = 18/38 (47%), Positives = 20/38 (52%)
 Frame = +2

Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
           GP  LP  P P+ P GP P +P  PGP G  PP    P
Sbjct: 280 GPPGLPGPPGPQMPPGP-PGLPGAPGPKG--PPGTNGP 314



 Score = 34.7 bits (76), Expect = 0.083
 Identities = 18/38 (47%), Positives = 20/38 (52%)
 Frame = +2

Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
           GP  LP  P P+ P GP P +P  PGP G  PP    P
Sbjct: 365 GPPGLPGPPGPQMPPGP-PGLPGAPGPKG--PPGTNGP 399



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/38 (44%), Positives = 18/38 (47%)
 Frame = +2

Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
           GP  LP  P P +P  P P  P  PGP G  PP    P
Sbjct: 620 GPAGLPGPPGPASPPSP-PGPPGPPGPKG--PPGPNGP 654



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +2

Query: 635 GPVRLPLRPQPETPSGPE-PRMPFGP-GPDGRMPPFAQA 745
           GP   P  P P  P GP+ P  P GP GP G   P   A
Sbjct: 799 GPASPPSPPGPPGPPGPKGPPGPNGPLGPPGECGPAGNA 837


>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 550

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = +2

Query: 566 GGDEPRAINFPEPQSQVFAFPLTGPVRL--PLRPQPETPSGPEPRMPFGPGPDGRMPPFA 739
           GG      N P P   +   P   P+ +  P R  P  P GP P    GP P   MPP  
Sbjct: 449 GGPPQLPPNLPPPPGGMRGMP-PPPMGMYPPPRGFPPPPFGPPPPFYRGPPPPRGMPP-- 505

Query: 740 QAPEQRMP 763
             P QRMP
Sbjct: 506 -PPRQRMP 512



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 578 PRAINFP--EPQSQVFAFPLTGPV-RLPLRPQPETPSGPEPRMPFGPGPDGRMPP 733
           P A+  P  E + Q   F L+ P   + L P P+    P+PR P G  P G  PP
Sbjct: 399 PGALPAPPAEKEDQGDYFNLSTPAANMRLPPPPQHTGPPQPRPPHGM-PQGGGPP 452


>SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 442

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +2

Query: 644 RLPLR--PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           RLP R  P    PSG  P  R+P G  P GR+P   Q P +R+P
Sbjct: 87  RLPSRRLPSRRLPSGRLPSRRLPSGRLPSGRLPS-GQLPSRRLP 129



 Score = 31.5 bits (68), Expect = 0.77
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
 Frame = +2

Query: 644 RLPLR--PQPETPSG--PEPRMPFGPGPDGRMP----PFAQAPEQRMP 763
           RLP R  P    PSG  P  R+P G  P GR+P    P  + P +R+P
Sbjct: 239 RLPSRWLPSRRLPSGCLPSRRLPSGRLPSGRLPSRRLPSGRLPSRRLP 286



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +2

Query: 644 RLPLR--PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           RLP R  P    PSG  P  R+P G  P GR+P   + P +R+P
Sbjct: 7   RLPSRRLPSRRLPSGRLPSRRLPSGRLPSGRLPS-RRLPSRRLP 49



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +2

Query: 644 RLPLR--PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           RLP R  P    PSG  P  R+P G  P GR+P   + P +R+P
Sbjct: 37  RLPSRRLPSRRLPSGRLPSRRLPSGRLPSGRLPS-RRLPSRRLP 79



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 659 PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P    PSG  P  ++P GP P GR+P     P +R+P
Sbjct: 396 PSRRLPSGRLPSRQLPSGPLPSGRLPS-GCLPSRRLP 431



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 659 PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P    PSG  P  R+P G  P GR+P   + P +R+P
Sbjct: 281 PSRRLPSGRLPSRRLPSGRLPSGRLPS-GRLPSRRLP 316



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 659 PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P    PSG  P  R+P G  P GR+P   + P +R+P
Sbjct: 301 PSGRLPSGRLPSRRLPSGRLPSGRLPS-GRLPSRRLP 336



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +2

Query: 659 PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P    PSG  P  R+P G  P GR+P   + P  R+P
Sbjct: 321 PSGRLPSGRLPSRRLPSGQLPSGRLPS-GRLPSGRLP 356



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = +2

Query: 647 LPLR--PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           LP R  P    PSG  P  R+P G  P GR+P     P +R+P
Sbjct: 210 LPSRRLPSRRLPSGRLPSRRLPSGRLPSGRLPS-RWLPSRRLP 251


>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2870

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 632 TGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPP 733
           T P   P  P+P TP+ P P +P  P P   +PP
Sbjct: 892 TAPPTTPTTPKPTTPA-PPPPLPLAPEPPPPLPP 924


>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
          Length = 1410

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = +2

Query: 566 GGDEPRAIN-FPEPQSQ--VFAFPLTGP-VRLPLRPQPETPSGPEPRMPFGPGPDGRMPP 733
           G  EP + N   EP S     A P   P    P  PQP TP+ P+     GP P    PP
Sbjct: 308 GPSEPESSNKSSEPDSTPATNAPPSDSPSTTTPTTPQPPTPTTPKTHPQLGPPPPPPPPP 367

Query: 734 FAQAPEQ 754
               P++
Sbjct: 368 PTPPPDE 374


>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 476

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 23/63 (36%), Positives = 23/63 (36%)
 Frame = +2

Query: 575 EPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQ 754
           EP A     P SQ    P T P  LP  P P   S P P      GP     P    P Q
Sbjct: 314 EPAAFAPAPPPSQAPPPPKTIPSTLPPPPVPSATSAPPPWATSNSGP----KPLMSTPVQ 369

Query: 755 RMP 763
           R P
Sbjct: 370 RPP 372


>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1572

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P   P   P  P+   P  P PR+P    P  R+PP   AP QR+P
Sbjct: 459 PRVPPPGAP-HPRVPPPGAPHPRVPPPGAPHPRVPP-PGAPHQRVP 502



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 23/66 (34%), Positives = 28/66 (42%)
 Frame = +2

Query: 566 GGDEPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQA 745
           G   PR   FP P +     P   P   P  P+   P  P PR+P    P  R+PP   A
Sbjct: 435 GAPHPR---FPPPGAP---HPRVPPPGAP-HPRVPPPGAPHPRVPPPGAPHPRVPP-PGA 486

Query: 746 PEQRMP 763
           P  R+P
Sbjct: 487 PHPRVP 492



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 23/66 (34%), Positives = 28/66 (42%)
 Frame = +2

Query: 566 GGDEPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQA 745
           G   PR    P P +    FP   P   P  P+   P  P PR+P    P  R+PP   A
Sbjct: 425 GAPHPRV---PPPGAPHPRFP---PPGAP-HPRVPPPGAPHPRVPPPGAPHPRVPP-PGA 476

Query: 746 PEQRMP 763
           P  R+P
Sbjct: 477 PHPRVP 482



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P   P   P  P+   P  P PR+P    P  R+PP   AP  R+P
Sbjct: 469 PRVPPPGAP-HPRVPPPGAPHPRVPPPGAPHQRVPP-PGAPHPRVP 512



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P   P   P  P+   P  P PR+P    P  R+PP   AP  R+P
Sbjct: 509 PRVPPPGAP-HPRVPPPGAPHPRVPPPGAPHPRVPP-PGAPHPRVP 552



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P   P   P  P+   P  P PR+P    P  ++PP   AP QR+P
Sbjct: 569 PRVPPPGAP-HPRVPPPGTPHPRVPPPGAPHPKVPP-PGAPYQRLP 612



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 22/66 (33%), Positives = 26/66 (39%)
 Frame = +2

Query: 566 GGDEPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQA 745
           G   PR    P P +     P  G     +RP    P  P PR+P    P  R PP   A
Sbjct: 395 GASHPRV---PPPGAPHPRVPPPGASHQRVRP----PGAPHPRVPPPGAPHPRFPP-PGA 446

Query: 746 PEQRMP 763
           P  R+P
Sbjct: 447 PHPRVP 452



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P   P   P +  P  P  P PR+P    P  R+PP   AP  R+P
Sbjct: 489 PRVPPPGAPHQRVPP-PGAPHPRVPPPGAPHPRVPP-PGAPHPRVP 532



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P   P   P  P+   P  P PR+P    P  R+PP   AP  ++P
Sbjct: 559 PRVPPPGAP-HPRVPPPGAPHPRVPPPGTPHPRVPP-PGAPHPKVP 602


>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 618

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = +2

Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPP 733
           GP   P  P+   P G  PR P GPGP   MPP
Sbjct: 413 GPHGPPFGPRGPPPHGGPPRGPMGPGPG--MPP 443



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +2

Query: 635 GPVRLPLRPQ-PETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           GP   P RP  P  P GP P  P GP P G  P     P   MP
Sbjct: 400 GPGMGPPRPMGPPGPHGP-PFGPRGPPPHGGPPRGPMGPGPGMP 442


>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
          Length = 305

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
 Frame = +2

Query: 578 PRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPS--GPEPRMPFGPGPDGRMPPFAQAPE 751
           PRA   P         P +   R P  P P  P+  GP P  P  P   G  PP   AP 
Sbjct: 114 PRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPA 173

Query: 752 QRMP 763
             +P
Sbjct: 174 ATVP 177


>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1414

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 32/89 (35%), Positives = 36/89 (40%)
 Frame = +2

Query: 467 RNDDPMERRFPFNILGAFAPRSAHAERVAIICHGGDEPRAINFPEPQSQVFAFPLTGPVR 646
           R DDP E R P    G    R    +R       G EPR   +  PQ         GP  
Sbjct: 659 RRDDPREDRRPGMSEGRGRDRPERPDRTG---ERGREPR---YSTPQ---------GP-D 702

Query: 647 LPLRPQPETPSGPEPRMPFGPGPDGRMPP 733
              RP P +P GP    P+GP P GR PP
Sbjct: 703 YHRRPSP-SPPGPPRNAPYGP-PRGRSPP 729


>SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)
          Length = 242

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQ 754
           P+T     P  P+P  P  P PR P GP       P +  P +
Sbjct: 60  PITPRPHRPTAPRPHDPIAPRPRSPHGPVAPRPHRPISPRPHR 102



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
 Frame = +2

Query: 635 GPVRL----PLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
           GP+ L    P  P P  P  P P  P  P P   + P  ++P
Sbjct: 43  GPISLRPHRPTIPSPHDPITPRPHRPTAPRPHDPIAPRPRSP 84


>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 393

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +2

Query: 596 PEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPP 733
           P+P +   A P   P   P  P P  P+ P P  PFG  P    PP
Sbjct: 162 PQPPAPPAA-PFMAPAAPPAPPPPGAPAAP-PAPPFGGPPSAPPPP 205


>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1705

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 635 GPVRLPLRPQPETPSGPEPRMPFG-PGPDGR 724
           GP+  P RP P+ P    PR P G PGP G+
Sbjct: 200 GPIGPPGRPGPKGPKDTCPRCPPGPPGPKGK 230


>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
          Length = 270

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 635 GPVRLPLRPQPETPSGPEPRMPFG-PGPDGR 724
           GP+  P RP P+ P    PR P G PGP G+
Sbjct: 200 GPIGPPGRPGPKGPKDTCPRCPPGPPGPKGK 230


>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 330

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 650 PLRPQPET--PSGPEPRMPFGPGPDGRMPP 733
           P  P P T  P+ P P+ P  PGPD   PP
Sbjct: 98  PATPPPPTMPPTPPPPQTPAPPGPDTPAPP 127



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 638 PVRLPLRPQPETPSGPEPRMPFGPGPDG 721
           P   P  P P+TP+ P P  P  P P G
Sbjct: 104 PTMPPTPPPPQTPAPPGPDTPAPPAPGG 131


>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
          Length = 1903

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 635  GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
            GP+ LP    P+ P GP P  P  PGP G +P +  AP
Sbjct: 1677 GPMGLPGPQGPDGPKGP-PGPPGLPGPQG-IPGYPGAP 1712


>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
          Length = 2532

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = +2

Query: 5   ARSSCHQLEQLDAMLDK------ELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSS 166
           ARS+  + E+LD + +K      +L LEG   G         +PL N + +  +  ML +
Sbjct: 339 ARSNAKEREELDRLFEKYVPASVDLILEGILDGKQGKKLKTIIPLTNLNMVEQLSHMLDA 398

Query: 167 VLPETSQPSSSRPSL 211
           +LP     +   P +
Sbjct: 399 LLPPAESSNFLGPDV 413


>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
          Length = 867

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = +2

Query: 629 LTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
           +T P   P RP P  P  P P  P  P P    PP    P
Sbjct: 201 ITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRP 240



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = +2

Query: 596 PEPQSQVFAFPLTGPVRLPLRPQPETPSGPE-PRMPFGPGPDGRMPPFAQAPE 751
           P   SQ+   P   P   P  P P  P  P  PR P  P P    P  A+ PE
Sbjct: 195 PTSPSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPE 247


>SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
          Length = 515

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = +2

Query: 572 DEPRAINFP---EPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQ 742
           D PR  +F    +P++Q    P  GP + P  PQ   P   +PR   G GP   M   + 
Sbjct: 374 DGPREQDFRGPRDPRAQPAHNPRPGP-QDPRGPQDRRPPNEQPRSQEGSGPKPLMSLLSL 432

Query: 743 AP 748
           AP
Sbjct: 433 AP 434


>SB_33344| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 331

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 642 YASLCVLSQRHL-PVLNPGCLLDLVLTVECHLSHKLLNK 755
           Y  L ++SQ +L P L+  C LDL L  +C+L   L N+
Sbjct: 209 YLDLALVSQCYLNPALDNQCYLDLALDNQCYLDLALDNQ 247



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 642 YASLCVLSQRHL-PVLNPGCLLDLVLTVECHLSHKLLNK 755
           Y  L ++S+ +L P L+  C LDL L  +C+L   L N+
Sbjct: 66  YLDLALVSEYYLNPALDNQCYLDLALDNQCYLDLALDNQ 104



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +3

Query: 642 YASLCVLSQRHLPV-LNPGCLLDLVLTVECHLSHKLLNK 755
           Y  L ++SQ +L + L+  C LDL L  +C+L+  L N+
Sbjct: 189 YLDLALVSQCYLDLALDNQCYLDLALVSQCYLNPALDNQ 227


>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
          Length = 2735

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 599  EPQSQVFAFPLTGPVRLPLRPQPETPSG-PEPRMPFGP 709
            +PQ Q    PL G     + PQP+ P G P+ ++P  P
Sbjct: 2323 QPQQQYVQQPLEGSQGYQVIPQPQEPQGLPQAQLPMIP 2360


>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
          Length = 797

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 479 PMERRFPFNILGA-FAPRSAHAERVAIICHGGDEPRAINFPEPQSQVFAFPLTGPVRLPL 655
           P E + P   L A F PR  H+ R  +       PR ++ P  Q   +  P   P  L  
Sbjct: 178 PREHQSPRTPLPAYFTPRVIHSPRTPL-------PRVLHSPRTQLPAYFIPRVLPSPLNQ 230

Query: 656 RPQPETPSGPEPRMPFGPGPDGRMPPF 736
            P   TP    PR+   P P  ++P +
Sbjct: 231 LPAYTTPRYFTPRVL--PSPRNQLPAY 255



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/80 (25%), Positives = 34/80 (42%)
 Frame = +2

Query: 524 PRSAHAERVAIICHGGDEPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPF 703
           PR  H+ R  +  +    PR ++ P P++ + A+P    +  P +P P   S    + P 
Sbjct: 354 PRVLHSPRNPLPAYF--TPRVLHSP-PRTSLLAYPTPRVLDSPRKPLPAYTSPCVHQSPR 410

Query: 704 GPGPDGRMPPFAQAPEQRMP 763
            P P    P    +P   +P
Sbjct: 411 TPVPTYFTPRIHHSPRTSLP 430


>SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055)
          Length = 695

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +2

Query: 524 PRSAHAERVAIICHGGDEPRAINFPEPQSQVFAFPLTGPVRLPL-RPQPETPSGPEPRMP 700
           PR   A ++A       +   I+ PEP  +    PL   V+ PL  P P+  S  + R  
Sbjct: 344 PRPPRASKIAAPLAPSLQAVCIDLPEPPLKAGDSPLKRSVKAPLPPPPPQQASRIDYRAS 403

Query: 701 FGPGP 715
           +G  P
Sbjct: 404 YGAAP 408



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +2

Query: 524 PRSAHAERVAIICHGGDEPRAINFPEPQSQVFAFPLTGPVRLPL-RPQPETPSGPEPRMP 700
           PR   A ++A       +   I+ PEP  +    PL   V+ PL  P P+  S  + R  
Sbjct: 203 PRPPRASKIAAPPAPSLQAVCIDLPEPPLKAGDSPLKRSVKAPLPPPPPQQASRIDYRAS 262

Query: 701 FGPGP 715
           +G  P
Sbjct: 263 YGAAP 267


>SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 274

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 602 PQSQVFAFPLTGPVRLPLRPQ--PETPSGPEPRMPFGPGP 715
           PQ  +   P  G   +P +PQ  P+TPS   P +PF P P
Sbjct: 51  PQMGMPPPPGPGQPEMPGQPQVTPQTPSPASPGLPFMPPP 90


>SB_13891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 160

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +2

Query: 422 LANNQKGRMNCVVERRNDDPMERRFPFNILGAFAPRSAHAERVAIIC 562
           +A+ Q+G M C       D M R  P  + G  A R   AER  + C
Sbjct: 58  VADLQRGHMRCSFRISERDNMSRDNPAIVFGDLASRDPSAERGNMSC 104


>SB_28322| Best HMM Match : Ion_trans (HMM E-Value=1.6e-41)
          Length = 263

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/61 (26%), Positives = 32/61 (52%)
 Frame = -1

Query: 421 ESARQLIKVKLNRQFEHRSNRFKFVVLFSRTVGLRTLITRVW*VILIVVNFLQFVFVYFG 242
           E+  +LI  KLN  F    N F F+++ +  VG+   + +    +++++  L FV+   G
Sbjct: 81  EAILKLIAFKLN-YFRDYWNVFDFIIVVTTLVGVLLELVQALPYVVMLIAMLFFVYAVIG 139

Query: 241 L 239
           +
Sbjct: 140 M 140


>SB_28017| Best HMM Match : GTF2I (HMM E-Value=2.3)
          Length = 389

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 497 PFNILGAFAPRSAHAERVAII 559
           PF + GA  PRS HA RV ++
Sbjct: 18  PFTLRGAAVPRSRHAGRVTVV 38


>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1212

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/42 (38%), Positives = 17/42 (40%)
 Frame = +2

Query: 638  PVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
            P   PL P P  PS P   +P  P      PP   AP  R P
Sbjct: 1036 PSAQPL-PPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQP 1076


>SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 167

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
 Frame = +2

Query: 602 PQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFG---PGPDGRMP--PFAQAP 748
           P  Q    PLT     PL  +   P+G +P  P G     P G+ P  P  Q P
Sbjct: 40  PMIQQANNPLTEQANNPLTQEANNPTGQQPNQPTGQQPTDPTGQQPNDPTGQQP 93


>SB_38437| Best HMM Match : VWA (HMM E-Value=0)
          Length = 3445

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
 Frame = +2

Query: 611  QVFAFPLTGPV-----RLPLRPQP-ETPSGPEPRMPFGPGPDG 721
            Q++++ LTG       RL  R +P + P+G     P  PGPDG
Sbjct: 1010 QIYSYELTGAEIQKVKRLCFRARPTKRPTGKPTTKPITPGPDG 1052


>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2248

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
 Frame = +2

Query: 590  NFPEPQSQVFA--FPLTGPVRL-PLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748
            N P P  Q  A   P  GP  +   R  P  P GP    P GP P G  PP    P
Sbjct: 2122 NTPPPMGQYGAPARPAMGPPPMGSSRYGPPPPMGPARHSPSGPSPLG-APPSVPPP 2176


>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
          Length = 1463

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +2

Query: 659 PQPETPSGPEPRMPFGP---GPDGRMPPFAQAPEQRMP 763
           P+   P GP+ R P GP   GPDG   P  + PE+R P
Sbjct: 834 PRFRGPEGPQFRGPDGPHFGGPDG---PRFRGPEERGP 868


>SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)
          Length = 524

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 575 EPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFG 706
           EP     PEP+ +    P   P   P  P+PE    PEP + FG
Sbjct: 263 EPEPEQEPEPEPEPEPEPEPEPEPEP-EPEPEPVHVPEPEISFG 305


>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
          Length = 457

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = +2

Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           P   P   P  PQP  P  P P  P  P P    PP A  P    P
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427


>SB_585| Best HMM Match : G_glu_transpept (HMM E-Value=0.00035)
          Length = 169

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 140 HGVPPMLSSVLPETSQP-SSSRPSLFKDDA 226
           +G+PP  ++ +    +P SS+ PS+F+DD+
Sbjct: 31  YGIPPSAANFIVPRKRPLSSTAPSVFRDDS 60


>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1853

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
 Frame = +2

Query: 632  TGPVRLPLRPQPETPSGPEPRMPF-----GPGPDGRM-PPFAQAP 748
            +GP   P +P P  P GPE R  F       G  GRM PP    P
Sbjct: 1054 SGPPGTPGQPGPPGPRGPEGRQGFPGFKGNQGEKGRMGPPGTSEP 1098


>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
          Length = 382

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 650 PLRPQPETPSGPEPRMPFGPGPDGRMPP 733
           P  P P  P+ P P +P  P P+  +PP
Sbjct: 272 PAPPNPSIPAPPNPSIPLAP-PNPYIPP 298


>SB_28631| Best HMM Match : Drf_FH1 (HMM E-Value=0.35)
          Length = 240

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 611 QVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPG 712
           Q +A   T P  LP    P+ P G  P +P  PG
Sbjct: 54  QYYATMQTAPPPLPTEAVPDGPPGEHPDLPPPPG 87


>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
          Length = 1467

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 653 LRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763
           + P P +P  P P  P+ P P    P ++ +    MP
Sbjct: 385 MSPTPGSPVSPGPTSPYIPSPAAASPGYSPSSPAFMP 421


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,899,095
Number of Sequences: 59808
Number of extensions: 521561
Number of successful extensions: 2744
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2608
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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