BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0177 (763 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036 SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 35 0.063 SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11 SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25 SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25 SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 33 0.25 SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44 SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44 SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44 SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 32 0.44 SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58 SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) 31 0.77 SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77 SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 31 1.0 SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4 SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 30 1.8 SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 30 2.4 SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 2.4 SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 29 3.1 SB_33344| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 3.1 SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 29 4.1 SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055) 29 4.1 SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_13891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_28322| Best HMM Match : Ion_trans (HMM E-Value=1.6e-41) 29 5.5 SB_28017| Best HMM Match : GTF2I (HMM E-Value=2.3) 29 5.5 SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5 SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_38437| Best HMM Match : VWA (HMM E-Value=0) 28 7.2 SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 28 7.2 SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 28 7.2 SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 28 7.2 SB_585| Best HMM Match : G_glu_transpept (HMM E-Value=0.00035) 28 7.2 SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5 SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 9.5 SB_28631| Best HMM Match : Drf_FH1 (HMM E-Value=0.35) 28 9.5 SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 28 9.5 >SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 290 Score = 35.9 bits (79), Expect = 0.036 Identities = 15/46 (32%), Positives = 19/46 (41%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P P P P P P+ P P P+ P P+ PP+ P P Sbjct: 186 PYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNP 231 Score = 34.7 bits (76), Expect = 0.083 Identities = 15/41 (36%), Positives = 17/41 (41%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 P P P P P P P P P+ P P+ PP AP Sbjct: 107 PYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAP 147 Score = 34.3 bits (75), Expect = 0.11 Identities = 20/62 (32%), Positives = 22/62 (35%) Frame = +2 Query: 578 PRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQR 757 P N P P + P P P P P P P P P P P+ PP AP Sbjct: 162 PPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPP 221 Query: 758 MP 763 P Sbjct: 222 YP 223 Score = 33.5 bits (73), Expect = 0.19 Identities = 14/41 (34%), Positives = 16/41 (39%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 P P P P P P P P P+ P P+ PP P Sbjct: 115 PYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPP 155 Score = 32.7 bits (71), Expect = 0.33 Identities = 15/46 (32%), Positives = 17/46 (36%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P P P P P P P P P+ P P+ PP P P Sbjct: 123 PYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPP 168 Score = 32.3 bits (70), Expect = 0.44 Identities = 21/66 (31%), Positives = 25/66 (37%) Frame = +2 Query: 566 GGDEPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQA 745 GG P + P P +P P P P P P P P P+ P P+ PP A Sbjct: 81 GGHPPTNFS-PNPPYPPPPYPPYPPPP-PYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNA 138 Query: 746 PEQRMP 763 P P Sbjct: 139 PYPPSP 144 Score = 30.3 bits (65), Expect = 1.8 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = +2 Query: 593 FPEPQSQVFAFPLTGPVRLPLRPQ-PETPSGPEPRMPFGPGPDGRMPPFAQAP 748 +P P + + P P P P P P+ P P P+ P P+ PP+ P Sbjct: 187 YPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNP--PYPPPPNAPNPPYPPPP 237 Score = 29.9 bits (64), Expect = 2.4 Identities = 17/57 (29%), Positives = 21/57 (36%) Frame = +2 Query: 593 FPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 +P P + + PL P P P P P P P P P PP+ P P Sbjct: 148 YPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNP 204 Score = 29.5 bits (63), Expect = 3.1 Identities = 16/57 (28%), Positives = 20/57 (35%) Frame = +2 Query: 593 FPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 +P + + P P PL P P P P P P P PP+ P P Sbjct: 140 YPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYP 196 Score = 29.5 bits (63), Expect = 3.1 Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Frame = +2 Query: 593 FPEPQSQVFAFPLTGPVRLPLR-PQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 +P P + + P P P P P P+ P P P P P PP A P P Sbjct: 179 YPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPP 236 Score = 29.1 bits (62), Expect = 4.1 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Frame = +2 Query: 593 FPEPQSQVFAFPLTGPVRLPLR-PQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 +P P + + P P P P P +P+ P P P P P PP P P Sbjct: 116 YPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAP 173 Score = 27.9 bits (59), Expect = 9.5 Identities = 14/39 (35%), Positives = 15/39 (38%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQ 742 P P P P P P+ P P P P P PP Q Sbjct: 202 PNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPPPNPQ 240 >SB_59302| Best HMM Match : Collagen (HMM E-Value=0) Length = 993 Score = 35.1 bits (77), Expect = 0.063 Identities = 18/38 (47%), Positives = 21/38 (55%) Frame = +2 Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 GP LP P P+ P GP P +P PGP+G PP P Sbjct: 450 GPPGLPGPPGPQMPPGP-PGLPGAPGPNG--PPGINGP 484 Score = 35.1 bits (77), Expect = 0.063 Identities = 18/38 (47%), Positives = 21/38 (55%) Frame = +2 Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 GP LP P P+ P GP P +P PGP+G PP P Sbjct: 535 GPPGLPGPPGPQMPPGP-PGLPGAPGPNG--PPGINGP 569 Score = 34.7 bits (76), Expect = 0.083 Identities = 18/38 (47%), Positives = 20/38 (52%) Frame = +2 Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 GP LP P P+ P GP P +P PGP G PP P Sbjct: 280 GPPGLPGPPGPQMPPGP-PGLPGAPGPKG--PPGTNGP 314 Score = 34.7 bits (76), Expect = 0.083 Identities = 18/38 (47%), Positives = 20/38 (52%) Frame = +2 Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 GP LP P P+ P GP P +P PGP G PP P Sbjct: 365 GPPGLPGPPGPQMPPGP-PGLPGAPGPKG--PPGTNGP 399 Score = 29.9 bits (64), Expect = 2.4 Identities = 17/38 (44%), Positives = 18/38 (47%) Frame = +2 Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 GP LP P P +P P P P PGP G PP P Sbjct: 620 GPAGLPGPPGPASPPSP-PGPPGPPGPKG--PPGPNGP 654 Score = 29.1 bits (62), Expect = 4.1 Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Frame = +2 Query: 635 GPVRLPLRPQPETPSGPE-PRMPFGP-GPDGRMPPFAQA 745 GP P P P P GP+ P P GP GP G P A Sbjct: 799 GPASPPSPPGPPGPPGPKGPPGPNGPLGPPGECGPAGNA 837 >SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 550 Score = 34.3 bits (75), Expect = 0.11 Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Frame = +2 Query: 566 GGDEPRAINFPEPQSQVFAFPLTGPVRL--PLRPQPETPSGPEPRMPFGPGPDGRMPPFA 739 GG N P P + P P+ + P R P P GP P GP P MPP Sbjct: 449 GGPPQLPPNLPPPPGGMRGMP-PPPMGMYPPPRGFPPPPFGPPPPFYRGPPPPRGMPP-- 505 Query: 740 QAPEQRMP 763 P QRMP Sbjct: 506 -PPRQRMP 512 Score = 27.9 bits (59), Expect = 9.5 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = +2 Query: 578 PRAINFP--EPQSQVFAFPLTGPV-RLPLRPQPETPSGPEPRMPFGPGPDGRMPP 733 P A+ P E + Q F L+ P + L P P+ P+PR P G P G PP Sbjct: 399 PGALPAPPAEKEDQGDYFNLSTPAANMRLPPPPQHTGPPQPRPPHGM-PQGGGPP 452 >SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 442 Score = 33.1 bits (72), Expect = 0.25 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Frame = +2 Query: 644 RLPLR--PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763 RLP R P PSG P R+P G P GR+P Q P +R+P Sbjct: 87 RLPSRRLPSRRLPSGRLPSRRLPSGRLPSGRLPS-GQLPSRRLP 129 Score = 31.5 bits (68), Expect = 0.77 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 8/48 (16%) Frame = +2 Query: 644 RLPLR--PQPETPSG--PEPRMPFGPGPDGRMP----PFAQAPEQRMP 763 RLP R P PSG P R+P G P GR+P P + P +R+P Sbjct: 239 RLPSRWLPSRRLPSGCLPSRRLPSGRLPSGRLPSRRLPSGRLPSRRLP 286 Score = 31.1 bits (67), Expect = 1.0 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Frame = +2 Query: 644 RLPLR--PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763 RLP R P PSG P R+P G P GR+P + P +R+P Sbjct: 7 RLPSRRLPSRRLPSGRLPSRRLPSGRLPSGRLPS-RRLPSRRLP 49 Score = 31.1 bits (67), Expect = 1.0 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Frame = +2 Query: 644 RLPLR--PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763 RLP R P PSG P R+P G P GR+P + P +R+P Sbjct: 37 RLPSRRLPSRRLPSGRLPSRRLPSGRLPSGRLPS-RRLPSRRLP 79 Score = 29.5 bits (63), Expect = 3.1 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = +2 Query: 659 PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P PSG P ++P GP P GR+P P +R+P Sbjct: 396 PSRRLPSGRLPSRQLPSGPLPSGRLPS-GCLPSRRLP 431 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = +2 Query: 659 PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P PSG P R+P G P GR+P + P +R+P Sbjct: 281 PSRRLPSGRLPSRRLPSGRLPSGRLPS-GRLPSRRLP 316 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = +2 Query: 659 PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P PSG P R+P G P GR+P + P +R+P Sbjct: 301 PSGRLPSGRLPSRRLPSGRLPSGRLPS-GRLPSRRLP 336 Score = 28.3 bits (60), Expect = 7.2 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = +2 Query: 659 PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P PSG P R+P G P GR+P + P R+P Sbjct: 321 PSGRLPSGRLPSRRLPSGQLPSGRLPS-GRLPSGRLP 356 Score = 27.9 bits (59), Expect = 9.5 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = +2 Query: 647 LPLR--PQPETPSG--PEPRMPFGPGPDGRMPPFAQAPEQRMP 763 LP R P PSG P R+P G P GR+P P +R+P Sbjct: 210 LPSRRLPSRRLPSGRLPSRRLPSGRLPSGRLPS-RWLPSRRLP 251 >SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2870 Score = 33.1 bits (72), Expect = 0.25 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 632 TGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPP 733 T P P P+P TP+ P P +P P P +PP Sbjct: 892 TAPPTTPTTPKPTTPA-PPPPLPLAPEPPPPLPP 924 >SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) Length = 1410 Score = 33.1 bits (72), Expect = 0.25 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%) Frame = +2 Query: 566 GGDEPRAIN-FPEPQSQ--VFAFPLTGP-VRLPLRPQPETPSGPEPRMPFGPGPDGRMPP 733 G EP + N EP S A P P P PQP TP+ P+ GP P PP Sbjct: 308 GPSEPESSNKSSEPDSTPATNAPPSDSPSTTTPTTPQPPTPTTPKTHPQLGPPPPPPPPP 367 Query: 734 FAQAPEQ 754 P++ Sbjct: 368 PTPPPDE 374 >SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 476 Score = 32.3 bits (70), Expect = 0.44 Identities = 23/63 (36%), Positives = 23/63 (36%) Frame = +2 Query: 575 EPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQ 754 EP A P SQ P T P LP P P S P P GP P P Q Sbjct: 314 EPAAFAPAPPPSQAPPPPKTIPSTLPPPPVPSATSAPPPWATSNSGP----KPLMSTPVQ 369 Query: 755 RMP 763 R P Sbjct: 370 RPP 372 >SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1572 Score = 32.3 bits (70), Expect = 0.44 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P P P P+ P P PR+P P R+PP AP QR+P Sbjct: 459 PRVPPPGAP-HPRVPPPGAPHPRVPPPGAPHPRVPP-PGAPHQRVP 502 Score = 31.1 bits (67), Expect = 1.0 Identities = 23/66 (34%), Positives = 28/66 (42%) Frame = +2 Query: 566 GGDEPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQA 745 G PR FP P + P P P P+ P P PR+P P R+PP A Sbjct: 435 GAPHPR---FPPPGAP---HPRVPPPGAP-HPRVPPPGAPHPRVPPPGAPHPRVPP-PGA 486 Query: 746 PEQRMP 763 P R+P Sbjct: 487 PHPRVP 492 Score = 29.9 bits (64), Expect = 2.4 Identities = 23/66 (34%), Positives = 28/66 (42%) Frame = +2 Query: 566 GGDEPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQA 745 G PR P P + FP P P P+ P P PR+P P R+PP A Sbjct: 425 GAPHPRV---PPPGAPHPRFP---PPGAP-HPRVPPPGAPHPRVPPPGAPHPRVPP-PGA 476 Query: 746 PEQRMP 763 P R+P Sbjct: 477 PHPRVP 482 Score = 29.9 bits (64), Expect = 2.4 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P P P P+ P P PR+P P R+PP AP R+P Sbjct: 469 PRVPPPGAP-HPRVPPPGAPHPRVPPPGAPHQRVPP-PGAPHPRVP 512 Score = 29.9 bits (64), Expect = 2.4 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P P P P+ P P PR+P P R+PP AP R+P Sbjct: 509 PRVPPPGAP-HPRVPPPGAPHPRVPPPGAPHPRVPP-PGAPHPRVP 552 Score = 29.9 bits (64), Expect = 2.4 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P P P P+ P P PR+P P ++PP AP QR+P Sbjct: 569 PRVPPPGAP-HPRVPPPGTPHPRVPPPGAPHPKVPP-PGAPYQRLP 612 Score = 28.7 bits (61), Expect = 5.5 Identities = 22/66 (33%), Positives = 26/66 (39%) Frame = +2 Query: 566 GGDEPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQA 745 G PR P P + P G +RP P P PR+P P R PP A Sbjct: 395 GASHPRV---PPPGAPHPRVPPPGASHQRVRP----PGAPHPRVPPPGAPHPRFPP-PGA 446 Query: 746 PEQRMP 763 P R+P Sbjct: 447 PHPRVP 452 Score = 28.3 bits (60), Expect = 7.2 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P P P + P P P PR+P P R+PP AP R+P Sbjct: 489 PRVPPPGAPHQRVPP-PGAPHPRVPPPGAPHPRVPP-PGAPHPRVP 532 Score = 27.9 bits (59), Expect = 9.5 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P P P P+ P P PR+P P R+PP AP ++P Sbjct: 559 PRVPPPGAP-HPRVPPPGAPHPRVPPPGTPHPRVPP-PGAPHPKVP 602 >SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 618 Score = 32.3 bits (70), Expect = 0.44 Identities = 16/33 (48%), Positives = 17/33 (51%) Frame = +2 Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPP 733 GP P P+ P G PR P GPGP MPP Sbjct: 413 GPHGPPFGPRGPPPHGGPPRGPMGPGPG--MPP 443 Score = 28.7 bits (61), Expect = 5.5 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Frame = +2 Query: 635 GPVRLPLRPQ-PETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 GP P RP P P GP P P GP P G P P MP Sbjct: 400 GPGMGPPRPMGPPGPHGP-PFGPRGPPPHGGPPRGPMGPGPGMP 442 >SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) Length = 305 Score = 32.3 bits (70), Expect = 0.44 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%) Frame = +2 Query: 578 PRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPS--GPEPRMPFGPGPDGRMPPFAQAPE 751 PRA P P + R P P P P+ GP P P P G PP AP Sbjct: 114 PRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPA 173 Query: 752 QRMP 763 +P Sbjct: 174 ATVP 177 >SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1414 Score = 31.9 bits (69), Expect = 0.58 Identities = 32/89 (35%), Positives = 36/89 (40%) Frame = +2 Query: 467 RNDDPMERRFPFNILGAFAPRSAHAERVAIICHGGDEPRAINFPEPQSQVFAFPLTGPVR 646 R DDP E R P G R +R G EPR + PQ GP Sbjct: 659 RRDDPREDRRPGMSEGRGRDRPERPDRTG---ERGREPR---YSTPQ---------GP-D 702 Query: 647 LPLRPQPETPSGPEPRMPFGPGPDGRMPP 733 RP P +P GP P+GP P GR PP Sbjct: 703 YHRRPSP-SPPGPPRNAPYGP-PRGRSPP 729 >SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) Length = 242 Score = 31.5 bits (68), Expect = 0.77 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQ 754 P+T P P+P P P PR P GP P + P + Sbjct: 60 PITPRPHRPTAPRPHDPIAPRPRSPHGPVAPRPHRPISPRPHR 102 Score = 27.9 bits (59), Expect = 9.5 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 4/42 (9%) Frame = +2 Query: 635 GPVRL----PLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 GP+ L P P P P P P P P P + P ++P Sbjct: 43 GPISLRPHRPTIPSPHDPITPRPHRPTAPRPHDPIAPRPRSP 84 >SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 393 Score = 31.5 bits (68), Expect = 0.77 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = +2 Query: 596 PEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPP 733 P+P + A P P P P P P+ P P PFG P PP Sbjct: 162 PQPPAPPAA-PFMAPAAPPAPPPPGAPAAP-PAPPFGGPPSAPPPP 205 >SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1705 Score = 31.1 bits (67), Expect = 1.0 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +2 Query: 635 GPVRLPLRPQPETPSGPEPRMPFG-PGPDGR 724 GP+ P RP P+ P PR P G PGP G+ Sbjct: 200 GPIGPPGRPGPKGPKDTCPRCPPGPPGPKGK 230 >SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) Length = 270 Score = 31.1 bits (67), Expect = 1.0 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +2 Query: 635 GPVRLPLRPQPETPSGPEPRMPFG-PGPDGR 724 GP+ P RP P+ P PR P G PGP G+ Sbjct: 200 GPIGPPGRPGPKGPKDTCPRCPPGPPGPKGK 230 >SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 330 Score = 30.7 bits (66), Expect = 1.4 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%) Frame = +2 Query: 650 PLRPQPET--PSGPEPRMPFGPGPDGRMPP 733 P P P T P+ P P+ P PGPD PP Sbjct: 98 PATPPPPTMPPTPPPPQTPAPPGPDTPAPP 127 Score = 29.9 bits (64), Expect = 2.4 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +2 Query: 638 PVRLPLRPQPETPSGPEPRMPFGPGPDG 721 P P P P+TP+ P P P P P G Sbjct: 104 PTMPPTPPPPQTPAPPGPDTPAPPAPGG 131 >SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) Length = 1903 Score = 30.3 bits (65), Expect = 1.8 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +2 Query: 635 GPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 GP+ LP P+ P GP P P PGP G +P + AP Sbjct: 1677 GPMGLPGPQGPDGPKGP-PGPPGLPGPQG-IPGYPGAP 1712 >SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) Length = 2532 Score = 29.9 bits (64), Expect = 2.4 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Frame = +2 Query: 5 ARSSCHQLEQLDAMLDK------ELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSS 166 ARS+ + E+LD + +K +L LEG G +PL N + + + ML + Sbjct: 339 ARSNAKEREELDRLFEKYVPASVDLILEGILDGKQGKKLKTIIPLTNLNMVEQLSHMLDA 398 Query: 167 VLPETSQPSSSRPSL 211 +LP + P + Sbjct: 399 LLPPAESSNFLGPDV 413 >SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) Length = 867 Score = 29.9 bits (64), Expect = 2.4 Identities = 15/40 (37%), Positives = 16/40 (40%) Frame = +2 Query: 629 LTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 +T P P RP P P P P P P P PP P Sbjct: 201 ITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRP 240 Score = 28.7 bits (61), Expect = 5.5 Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Frame = +2 Query: 596 PEPQSQVFAFPLTGPVRLPLRPQPETPSGPE-PRMPFGPGPDGRMPPFAQAPE 751 P SQ+ P P P P P P P PR P P P P A+ PE Sbjct: 195 PTSPSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPE 247 >SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3) Length = 515 Score = 29.5 bits (63), Expect = 3.1 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = +2 Query: 572 DEPRAINFP---EPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQ 742 D PR +F +P++Q P GP + P PQ P +PR G GP M + Sbjct: 374 DGPREQDFRGPRDPRAQPAHNPRPGP-QDPRGPQDRRPPNEQPRSQEGSGPKPLMSLLSL 432 Query: 743 AP 748 AP Sbjct: 433 AP 434 >SB_33344| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 331 Score = 29.5 bits (63), Expect = 3.1 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = +3 Query: 642 YASLCVLSQRHL-PVLNPGCLLDLVLTVECHLSHKLLNK 755 Y L ++SQ +L P L+ C LDL L +C+L L N+ Sbjct: 209 YLDLALVSQCYLNPALDNQCYLDLALDNQCYLDLALDNQ 247 Score = 28.7 bits (61), Expect = 5.5 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = +3 Query: 642 YASLCVLSQRHL-PVLNPGCLLDLVLTVECHLSHKLLNK 755 Y L ++S+ +L P L+ C LDL L +C+L L N+ Sbjct: 66 YLDLALVSEYYLNPALDNQCYLDLALDNQCYLDLALDNQ 104 Score = 28.3 bits (60), Expect = 7.2 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +3 Query: 642 YASLCVLSQRHLPV-LNPGCLLDLVLTVECHLSHKLLNK 755 Y L ++SQ +L + L+ C LDL L +C+L+ L N+ Sbjct: 189 YLDLALVSQCYLDLALDNQCYLDLALVSQCYLNPALDNQ 227 >SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) Length = 2735 Score = 29.5 bits (63), Expect = 3.1 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +2 Query: 599 EPQSQVFAFPLTGPVRLPLRPQPETPSG-PEPRMPFGP 709 +PQ Q PL G + PQP+ P G P+ ++P P Sbjct: 2323 QPQQQYVQQPLEGSQGYQVIPQPQEPQGLPQAQLPMIP 2360 >SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) Length = 797 Score = 29.1 bits (62), Expect = 4.1 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Frame = +2 Query: 479 PMERRFPFNILGA-FAPRSAHAERVAIICHGGDEPRAINFPEPQSQVFAFPLTGPVRLPL 655 P E + P L A F PR H+ R + PR ++ P Q + P P L Sbjct: 178 PREHQSPRTPLPAYFTPRVIHSPRTPL-------PRVLHSPRTQLPAYFIPRVLPSPLNQ 230 Query: 656 RPQPETPSGPEPRMPFGPGPDGRMPPF 736 P TP PR+ P P ++P + Sbjct: 231 LPAYTTPRYFTPRVL--PSPRNQLPAY 255 Score = 27.9 bits (59), Expect = 9.5 Identities = 20/80 (25%), Positives = 34/80 (42%) Frame = +2 Query: 524 PRSAHAERVAIICHGGDEPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPF 703 PR H+ R + + PR ++ P P++ + A+P + P +P P S + P Sbjct: 354 PRVLHSPRNPLPAYF--TPRVLHSP-PRTSLLAYPTPRVLDSPRKPLPAYTSPCVHQSPR 410 Query: 704 GPGPDGRMPPFAQAPEQRMP 763 P P P +P +P Sbjct: 411 TPVPTYFTPRIHHSPRTSLP 430 >SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055) Length = 695 Score = 29.1 bits (62), Expect = 4.1 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Frame = +2 Query: 524 PRSAHAERVAIICHGGDEPRAINFPEPQSQVFAFPLTGPVRLPL-RPQPETPSGPEPRMP 700 PR A ++A + I+ PEP + PL V+ PL P P+ S + R Sbjct: 344 PRPPRASKIAAPLAPSLQAVCIDLPEPPLKAGDSPLKRSVKAPLPPPPPQQASRIDYRAS 403 Query: 701 FGPGP 715 +G P Sbjct: 404 YGAAP 408 Score = 28.3 bits (60), Expect = 7.2 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Frame = +2 Query: 524 PRSAHAERVAIICHGGDEPRAINFPEPQSQVFAFPLTGPVRLPL-RPQPETPSGPEPRMP 700 PR A ++A + I+ PEP + PL V+ PL P P+ S + R Sbjct: 203 PRPPRASKIAAPPAPSLQAVCIDLPEPPLKAGDSPLKRSVKAPLPPPPPQQASRIDYRAS 262 Query: 701 FGPGP 715 +G P Sbjct: 263 YGAAP 267 >SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 274 Score = 29.1 bits (62), Expect = 4.1 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 602 PQSQVFAFPLTGPVRLPLRPQ--PETPSGPEPRMPFGPGP 715 PQ + P G +P +PQ P+TPS P +PF P P Sbjct: 51 PQMGMPPPPGPGQPEMPGQPQVTPQTPSPASPGLPFMPPP 90 >SB_13891| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 160 Score = 29.1 bits (62), Expect = 4.1 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +2 Query: 422 LANNQKGRMNCVVERRNDDPMERRFPFNILGAFAPRSAHAERVAIIC 562 +A+ Q+G M C D M R P + G A R AER + C Sbjct: 58 VADLQRGHMRCSFRISERDNMSRDNPAIVFGDLASRDPSAERGNMSC 104 >SB_28322| Best HMM Match : Ion_trans (HMM E-Value=1.6e-41) Length = 263 Score = 28.7 bits (61), Expect = 5.5 Identities = 16/61 (26%), Positives = 32/61 (52%) Frame = -1 Query: 421 ESARQLIKVKLNRQFEHRSNRFKFVVLFSRTVGLRTLITRVW*VILIVVNFLQFVFVYFG 242 E+ +LI KLN F N F F+++ + VG+ + + +++++ L FV+ G Sbjct: 81 EAILKLIAFKLN-YFRDYWNVFDFIIVVTTLVGVLLELVQALPYVVMLIAMLFFVYAVIG 139 Query: 241 L 239 + Sbjct: 140 M 140 >SB_28017| Best HMM Match : GTF2I (HMM E-Value=2.3) Length = 389 Score = 28.7 bits (61), Expect = 5.5 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 Query: 497 PFNILGAFAPRSAHAERVAII 559 PF + GA PRS HA RV ++ Sbjct: 18 PFTLRGAAVPRSRHAGRVTVV 38 >SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1212 Score = 28.7 bits (61), Expect = 5.5 Identities = 16/42 (38%), Positives = 17/42 (40%) Frame = +2 Query: 638 PVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P PL P P PS P +P P PP AP R P Sbjct: 1036 PSAQPL-PPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQP 1076 >SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 167 Score = 28.3 bits (60), Expect = 7.2 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 5/54 (9%) Frame = +2 Query: 602 PQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFG---PGPDGRMP--PFAQAP 748 P Q PLT PL + P+G +P P G P G+ P P Q P Sbjct: 40 PMIQQANNPLTEQANNPLTQEANNPTGQQPNQPTGQQPTDPTGQQPNDPTGQQP 93 >SB_38437| Best HMM Match : VWA (HMM E-Value=0) Length = 3445 Score = 28.3 bits (60), Expect = 7.2 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Frame = +2 Query: 611 QVFAFPLTGPV-----RLPLRPQP-ETPSGPEPRMPFGPGPDG 721 Q++++ LTG RL R +P + P+G P PGPDG Sbjct: 1010 QIYSYELTGAEIQKVKRLCFRARPTKRPTGKPTTKPITPGPDG 1052 >SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2248 Score = 28.3 bits (60), Expect = 7.2 Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%) Frame = +2 Query: 590 NFPEPQSQVFA--FPLTGPVRL-PLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAP 748 N P P Q A P GP + R P P GP P GP P G PP P Sbjct: 2122 NTPPPMGQYGAPARPAMGPPPMGSSRYGPPPPMGPARHSPSGPSPLG-APPSVPPP 2176 >SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) Length = 1463 Score = 28.3 bits (60), Expect = 7.2 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%) Frame = +2 Query: 659 PQPETPSGPEPRMPFGP---GPDGRMPPFAQAPEQRMP 763 P+ P GP+ R P GP GPDG P + PE+R P Sbjct: 834 PRFRGPEGPQFRGPDGPHFGGPDG---PRFRGPEERGP 868 >SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) Length = 524 Score = 28.3 bits (60), Expect = 7.2 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +2 Query: 575 EPRAINFPEPQSQVFAFPLTGPVRLPLRPQPETPSGPEPRMPFG 706 EP PEP+ + P P P P+PE PEP + FG Sbjct: 263 EPEPEQEPEPEPEPEPEPEPEPEPEP-EPEPEPVHVPEPEISFG 305 >SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) Length = 457 Score = 28.3 bits (60), Expect = 7.2 Identities = 17/46 (36%), Positives = 17/46 (36%) Frame = +2 Query: 626 PLTGPVRLPLRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 P P P PQP P P P P P P PP A P P Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427 >SB_585| Best HMM Match : G_glu_transpept (HMM E-Value=0.00035) Length = 169 Score = 28.3 bits (60), Expect = 7.2 Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = +2 Query: 140 HGVPPMLSSVLPETSQP-SSSRPSLFKDDA 226 +G+PP ++ + +P SS+ PS+F+DD+ Sbjct: 31 YGIPPSAANFIVPRKRPLSSTAPSVFRDDS 60 >SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1853 Score = 27.9 bits (59), Expect = 9.5 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Frame = +2 Query: 632 TGPVRLPLRPQPETPSGPEPRMPF-----GPGPDGRM-PPFAQAP 748 +GP P +P P P GPE R F G GRM PP P Sbjct: 1054 SGPPGTPGQPGPPGPRGPEGRQGFPGFKGNQGEKGRMGPPGTSEP 1098 >SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) Length = 382 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 Query: 650 PLRPQPETPSGPEPRMPFGPGPDGRMPP 733 P P P P+ P P +P P P+ +PP Sbjct: 272 PAPPNPSIPAPPNPSIPLAP-PNPYIPP 298 >SB_28631| Best HMM Match : Drf_FH1 (HMM E-Value=0.35) Length = 240 Score = 27.9 bits (59), Expect = 9.5 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +2 Query: 611 QVFAFPLTGPVRLPLRPQPETPSGPEPRMPFGPG 712 Q +A T P LP P+ P G P +P PG Sbjct: 54 QYYATMQTAPPPLPTEAVPDGPPGEHPDLPPPPG 87 >SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) Length = 1467 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = +2 Query: 653 LRPQPETPSGPEPRMPFGPGPDGRMPPFAQAPEQRMP 763 + P P +P P P P+ P P P ++ + MP Sbjct: 385 MSPTPGSPVSPGPTSPYIPSPAAASPGYSPSSPAFMP 421 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,899,095 Number of Sequences: 59808 Number of extensions: 521561 Number of successful extensions: 2744 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 2194 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2608 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2082369341 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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