Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0176
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P80684 Cluster: Pupal cuticle protein C1B; n=5; Endopte...    43   0.009
UniRef50_Q17MT9 Cluster: Putative uncharacterized protein; n=2; ...    36   1.4  
UniRef50_Q17MU1 Cluster: Cuticle protein, putative; n=4; Aedes a...    35   1.9  
UniRef50_P45588 Cluster: Cuticle protein 76; n=3; Neoptera|Rep: ...    35   2.5  
UniRef50_UPI00006CDDA9 Cluster: Insect antifreeze protein; n=1; ...    33   7.6  
UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa...    33   7.6  
UniRef50_Q57ZF4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_Q94804 Cluster: Cuticle protein LPCP-23 precursor; n=5;...    33   7.6  

>UniRef50_P80684 Cluster: Pupal cuticle protein C1B; n=5;
           Endopterygota|Rep: Pupal cuticle protein C1B - Tenebrio
           molitor (Yellow mealworm)
          Length = 161

 Score = 42.7 bits (96), Expect = 0.009
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = +3

Query: 660 ISYSAAPAVSHVSYSGLSGHYGW 728
           ++YSAAPAVSHV+Y+GL   YGW
Sbjct: 139 VAYSAAPAVSHVTYTGLGASYGW 161



 Score = 35.1 bits (77), Expect = 1.9
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = +3

Query: 657 AISYSAAPAVSHVSYSGLSGHYG 725
           A++YSAAPAVSHVSYS     YG
Sbjct: 9   AVAYSAAPAVSHVSYSSPVVSYG 31


>UniRef50_Q17MT9 Cluster: Putative uncharacterized protein; n=2;
           Neoptera|Rep: Putative uncharacterized protein - Aedes
           aegypti (Yellowfever mosquito)
          Length = 210

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 660 ISYSAAPAVSHVSYSGLSGHYGW 728
           ++YS A  V+HVSY G   HYGW
Sbjct: 188 LTYSPAVEVAHVSYDGTHAHYGW 210


>UniRef50_Q17MU1 Cluster: Cuticle protein, putative; n=4; Aedes
           aegypti|Rep: Cuticle protein, putative - Aedes aegypti
           (Yellowfever mosquito)
          Length = 260

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +3

Query: 660 ISYSAAPAVSHVSYSGLSGHYGW 728
           +SY+    VSHVSY   S HYGW
Sbjct: 238 VSYAPESTVSHVSYQDASAHYGW 260


>UniRef50_P45588 Cluster: Cuticle protein 76; n=3; Neoptera|Rep:
           Cuticle protein 76 - Locusta migratoria (Migratory
           locust)
          Length = 139

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +3

Query: 660 ISYSAAPAVSHVSYSGLSGHYGW 728
           ++YSAAPAV+H++YSGL   Y +
Sbjct: 117 VAYSAAPAVAHLTYSGLHAAYAY 139


>UniRef50_UPI00006CDDA9 Cluster: Insect antifreeze protein; n=1;
            Tetrahymena thermophila SB210|Rep: Insect antifreeze
            protein - Tetrahymena thermophila SB210
          Length = 3784

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 512  CGISCEWCSMRSISCNRCGSGVSRYRSDS 426
            C  +C+ C     SC +C SG  RY SDS
Sbjct: 1781 CDYTCKACLGSKTSCTKCDSGAYRYPSDS 1809


>UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa
           (japonica cultivar-group)|Rep: Os09g0441900 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 444

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -2

Query: 557 GIGCVRGGVSNRGCV-CGISCEWCSMRSISCNRCGS 453
           G GC   G +  GC  CG  C  C + S  CN CGS
Sbjct: 263 GCGCPSCGCNGCGCPSCG--CNGCGLPSCGCNGCGS 296


>UniRef50_Q57ZF4 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 516

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -2

Query: 548 CVRGGVSNRGCVCGISCEWC-SMRSISCNRCGSG 450
           C  G  S+R C C  SC  C S  S +C  CG G
Sbjct: 81  CSTGCDSSRSCSCSCSCSCCRSAYSSACRTCGRG 114


>UniRef50_Q94804 Cluster: Cuticle protein LPCP-23 precursor; n=5;
           Tenebrionidae|Rep: Cuticle protein LPCP-23 precursor -
           Tenebrio molitor (Yellow mealworm)
          Length = 231

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 654 SAISYSAAPAVSHVSYSGLSGHYGW 728
           +A+ YS A  VSH S++GL   Y W
Sbjct: 207 AAVGYSPAAVVSHTSFTGLGASYAW 231


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,213,694
Number of Sequences: 1657284
Number of extensions: 5293823
Number of successful extensions: 17205
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17145
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)