Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0176
(753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_46889| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_18736| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_20264| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 29 5.4
SB_40116| Best HMM Match : EGF (HMM E-Value=0) 28 7.1
SB_15409| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_16197| Best HMM Match : zf-CCHC (HMM E-Value=0.19) 28 9.4
SB_14707| Best HMM Match : A_deamin (HMM E-Value=0) 28 9.4
SB_23603| Best HMM Match : PH (HMM E-Value=1e-19) 28 9.4
>SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 288 QRRLNKKLEHMPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
+RR + P +V M +RLV M +RLV M +RL M
Sbjct: 840 KRRGGRSHARNPCTVVNDMCTRLVNDMCTRLVNGMCTRLVNDM 882
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL M
Sbjct: 858 MCTRLVNDMCTRLVNGMCTRLVNDMCTRLVNDM 890
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL M
Sbjct: 874 MCTRLVNDMCTRLVNDMCTRLVNGMCTRLVNDM 906
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL M
Sbjct: 882 MCTRLVNDMCTRLVNGMCTRLVNDMCTRLVNDM 914
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL M
Sbjct: 898 MCTRLVNDMCTRLVNDMCTRLVNGMCTRLVNGM 930
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL M
Sbjct: 906 MCTRLVNDMCTRLVNGMCTRLVNGMCTRLVSDM 938
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL M
Sbjct: 954 MCTRLVNDMCTRLVNDMCTRLVNDMCTRLVNDM 986
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL M
Sbjct: 866 MCTRLVNGMCTRLVNDMCTRLVNDMCTRLVNGM 898
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL M
Sbjct: 890 MCTRLVNGMCTRLVNDMCTRLVNDMCTRLVNGM 922
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL M
Sbjct: 914 MCTRLVNGMCTRLVNGMCTRLVSDMCTRLVNDM 946
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL M
Sbjct: 946 MCTQLVNGMCTRLVNDMCTRLVNDMCTRLVNDM 978
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M ++L M
Sbjct: 962 MCTRLVNDMCTRLVNDMCTRLVNDMCTQLVNGM 994
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M ++L M
Sbjct: 922 MCTRLVNGMCTRLVSDMCTRLVNDMCTQLVNGM 954
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 258 MPSKLVRHMLSRLVQSMLSRLVQSMLSRLAQSM 160
M ++LV M +RLV M +RLV M +RL +
Sbjct: 986 MCTQLVNGMCTRLVNDMCTRLVNDMCTRLVNDV 1018
>SB_46889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 754
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/64 (31%), Positives = 26/64 (40%)
Frame = -2
Query: 620 SCMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISCEWCSMRSISCNRCGSGVSR 441
+C GY GS C G C GG G + G +CE C + S + C GV
Sbjct: 280 TCECPVGYSGSTCEIDIDECAGNPCANGGTCKDG-INGFTCE-CPV-GYSGSTCEIGVKC 336
Query: 440 YRSD 429
Y +
Sbjct: 337 YNPE 340
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 620 SCMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISCE 495
SC V G+ G C + G C GG G + G +CE
Sbjct: 242 SCTCVAGFTGKNCKTDIDECAGNPCANGGTCKDG-INGFTCE 282
>SB_18736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1452
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 534 SKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 430
+++Q R R + V+ Q K Q QRRKSLQ+R
Sbjct: 312 TEEQRARQRQRDLVLTEEQRKKQTKSQRRKSLQQR 346
>SB_20264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 620 SCMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISCE 495
+C+ + G+ G+ C ++ +G C GG G + G +CE
Sbjct: 276 TCLCIPGFNGTNCETNIDECIGNPCANGGTCKDG-INGFTCE 316
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Frame = -2
Query: 620 SCMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISCEWC-----SMRSISCNRCG 456
SC V G+ G C + G C GG G + G +CE S I + C
Sbjct: 162 SCTCVAGFTGKNCETDIDECAGNPCANGGTCKDG-INGFTCECAVGYNGSTCEIDIDECA 220
Query: 455 SG 450
SG
Sbjct: 221 SG 222
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 567 ERHGHRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRR 448
E G R+ K S Q ++ RHK QH Q K +V QRR
Sbjct: 1589 EEAGRRMKKKESFQ--IKQRHKPARAQHGQPKRSKVHQRR 1626
>SB_40116| Best HMM Match : EGF (HMM E-Value=0)
Length = 340
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = -2
Query: 617 CMSVTGYRGSVCLSHQRSGMGIGCVRG-----GVSNRGCVCGISCEWCSMRSISCNRCGS 453
C + G+ G C ++ C+ G GV++ CVC I + ISCNR S
Sbjct: 139 CQCLPGFVGDNCETNVDDCADNPCLNGATCIDGVNDYYCVCAIGYYSKNCEHISCNRF-S 197
Query: 452 GVSRYRSDSFGEERST 405
V D F E ST
Sbjct: 198 VVVLLICDLFLSETST 213
>SB_15409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Frame = -2
Query: 566 SGMGIG-CVRG-GVSNRGC-VCGISC----EWCSMRSISCNRCGSG 450
SG G G C +G G +GC CG C C MR + CG+G
Sbjct: 264 SGKGCGTCGKGCGTCGKGCGTCGKGCGTCGAGCVMRDVMYRICGTG 309
>SB_16197| Best HMM Match : zf-CCHC (HMM E-Value=0.19)
Length = 241
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 570 KERHGHRLCKGRSKQQGLRVRHK 502
K H R+CK +SK Q +V+HK
Sbjct: 188 KLHHWERVCKSKSKTQPSKVQHK 210
>SB_14707| Best HMM Match : A_deamin (HMM E-Value=0)
Length = 1243
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = -1
Query: 597 QGQRMS*SPKERHGHRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 430
+GQ + K + + + +Q+ R + + + +QH + LQQ RQ+R+ LQ++
Sbjct: 237 EGQAIHSEEKPKMNLQYQQQPQQQRQQRQQLQQQQIQHHKQHLQQQRQQRQQLQQQ 292
>SB_23603| Best HMM Match : PH (HMM E-Value=1e-19)
Length = 274
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 302 QELLRPCRRRLSTHR*GRCTRSILR 376
+E+L+ CRRRLS+ G CT +R
Sbjct: 227 KEVLQKCRRRLSSSNRGSCTFEEIR 251
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,678,491
Number of Sequences: 59808
Number of extensions: 190433
Number of successful extensions: 621
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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