Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0176
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    31   0.050
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    28   0.27 
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    26   1.1  
DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.    24   4.4  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 30.7 bits (66), Expect = 0.050
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = -1

Query: 597 QGQRMS*SPKERHGHRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 430
           Q Q+     +++ G R    + +QQ  + +H+ +  Q  Q + QQ RQ+++  Q+R
Sbjct: 281 QQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQR 336



 Score = 28.7 bits (61), Expect = 0.20
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 537 RSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 430
           R +QQ LR R + R  Q  Q + QQ +Q+++  Q+R
Sbjct: 173 RKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQR 208


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -2

Query: 518 CVCGISCEWCSMRSISCNRCGSGVSRYRSDSF 423
           C+   +C WC+M + +  RC   + +Y  + +
Sbjct: 45  CIQTTNCRWCTMPNFTHPRCHGQIEKYCPEEY 76


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 494 WCSMRSISCNRCGSGVSRYRSDSFGEERSTMRC 396
           WC+   +  N C    S  R D  G++   MRC
Sbjct: 79  WCAEGKVGANECKLQCSSLRDDDIGDD---MRC 108


>DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 494 WCSMRSISCNRCGSGVSRYRSDSFGEERSTMRC 396
           WC+   +  N C    S  R D+  ++   MRC
Sbjct: 79  WCAEGKVGANECKLQCSSLRDDNIADD---MRC 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,934
Number of Sequences: 2352
Number of extensions: 6068
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)